Job Description P0ADT8 Confidence 22.03% Date Thu Jan 5 11:21:50 GMT 2012 Rank 381 Aligned Residues 60 % Identity 12% Template c3m06F_ PDB info PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 Resolution 2.67 Å

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Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	N	Q	V	K	T	L	T	D	K	L	T	N	I	D	N	T	W	N	Q	R	T	A	E	M	Q	Q	K	V	A	Q	S	D	S	V	I	N	G	L	K	E	E	N	Q	K	L	K	N	E	L	I	V	A	Q	K	K	V	D	A	A	S	V
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		E	L	L	Q	R	C	E	S	L	E	K	K	T	A	T	F	E	N	I	V	.	.	.	.	C	V	L	N	R	E	V	E	R	V	A	M	T	A	E	A	C	S	R	Q	H	R	L	D	Q	D	K	I	E	A	L	S	S	K	V	Q	Q	L	E	R
Template Known Secondary structure																						.	.	.	.
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions