 |
Job Description | P0ADT8 | Confidence | 33.87% | Date | Thu Jan 5 11:21:50 GMT 2012 |
Rank | 342 | Aligned Residues | 81 |
% Identity | 17% | Template | c3fd9C_ |
PDB info |
PDB header:unknown function | Chain: C: PDB Molecule:uncharacterized protein; |
PDBTitle: crystal structure of the transcriptional anti-activator exsd2 from pseudomonas aeruginosa
|
Resolution | 2.60 Å |
|
 |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | I | P | L | K | Q | L | S | T | E | P | S | L | R | S | R | V | P | D | L | E | N | Q | V | K | T | L | T | D | K | L | T | N | I | D | N | T | W | N | Q | R | T | A | E | M | Q | Q | K | V | A | Q | S | D | S | V | I | N | G | L | K | E | E | N | Q | K | L | K | N | E | L | I | V | A | Q | K | K | V | D | A |
Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
G | W | W | E | S | L | L | D | Q | A | I | P | G | W | R | L | S | L | V | E | L | E | T | Q | S | R | Q | L | R | I | K | S | E | F | W | S | R | V | A | E | L | E | P | E | Q | A | R | E | E | L | A | R | V | A | K | C | Q | A | R | T | Q | E | Q | V | A | E | L | A | G | K | L | E | T | A | S | A | L | A | K | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
158 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
A |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
A |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
209 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|