Job Description P0A784 Confidence 65.29% Date Thu Jan 5 11:05:03 GMT 2012 Rank 55 Aligned Residues 127 % Identity 19% Template d1vk0a_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

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		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		N	E	N	N	L	I	W	I	D	L	E	M	.	.	.	.	T	G	L	D	P	E	R	D	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	T
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.															.	.	.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	N	R	A	V	I	F	D	V	Y	W	D	V	G	F	T	K	T	S	G	W	S	L	S	S	V	K	L	S	.	.	.	.	T	R	N	L	C	L	F	L	R	.	.	.	.	L	P	K	P	F	H	D	N	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	T	T														G	G	G	G										.	.	.	.		S	S							.	.	.	.			S	S			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																	.	.	.	.	.	.									.	.	.
Query SS confidence																																																																	.	.	.	.	.	.									.	.	.
Query Sequence		M	G	D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	F	H	Y	R	Y	L	D	V	S	T	L	K	E	L	A	R	.	.	.	.	.	.	R	W	K	P	E	I	L	D	.	.	.
Query Conservation																																																																	.	.	.	.	.	.									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.								.	.	.	.																						.	.	.	.																			.	.	.	.	.	.									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.								.	.	.	.																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	Y	R	F	F	A	S	.	.	.	.	K	F	V	T	F	V	G	V	Q	I	E	E	D	L	D	L	L	R	E	N	H	.	.	.	.	G	L	V	I	R	N	A	I	N	V	G	K	L	A	A	E	A	R	G	T	L	V	L	E	F	L	G	T	R	E	L	A	H	R	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T		.	.	.	.	S	S	S					S	S													.	.	.	.					S	S													T		G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.								.	.	.	.																						.	.	.	.
Template SS confidence
											100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	K	Q	G	T	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	W	S	D	L	G	Q	L	D	S	I	E	A	K	W	E	K	A	G	P	E	E	Q	L	E	A	A	A	I	E	G	W	L	I	V	N	V	W	D	Q	L	S	D	E
Template Known Secondary structure															T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions