Job Description P0A784 Confidence 99.25% Date Thu Jan 5 11:05:03 GMT 2012 Rank 19 Aligned Residues 173 % Identity 12% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.												.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		A	N	E	N	N	L	I	W	I	D	L	E	M	T	G	L	D	P	E	R	D	.	.	.	.	.	.	.	.	.	.	.	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	.	.	.	.	.	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.														.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		V	S	Q	Y	N	H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	.	.	.	E	I	M	S	T	E	S	L	E	L	L
Template Known Secondary structure		T	T	T	S																										T	T													T	T					S	S	S		S						B				T	T		.	.	.
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.
		67	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.
Predicted Secondary structure								.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	S	G	L	V	.	E	R	V	K	A	S	T	M	G	D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	H	Y	R	Y	L	D
Query Conservation								.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																				.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		R	K	S	G	I	N	F	E	K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	.	.	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W	V	H	Q	Y	M	P	N	F	Y	D
Template Known Secondary structure				T	T											B											T	.	.	S	S		S	S		T	T	S					S	S	T	T											T	T	S				S	S													S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure														.	.	.	.	.	.	.									.
Query SS confidence														.	.	.	.	.	.	.									.
Query Sequence		V	S	T	L	K	E	L	A	R	R	W	K	.	.	.	.	.	.	.	P	E	I	L	D	G	F	T	.	K	Q	G	T	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H	F	I	K
Query Conservation														.	.	.	.	.	.	.									.
Alig confidence														.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		L	N	L	V	Y	K	I	I	Q	E	F	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	L	P	R	F	S	I	F	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K	L	S	M	H
Template Known Secondary structure										T	T	T					S								T	T					G	G	G	G	S																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions