Job Description P0A784 Confidence 98.14% Date Thu Jan 5 11:05:03 GMT 2012 Rank 31 Aligned Residues 164 % Identity 17% Template c3d45B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of mouse parn in complex with m7gpppg Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																										.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		N	L	I	W	I	D	L	E	M	T	G	L	D	P	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	I	E	I	A	T	L	V	T	D	.	.	.	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		D	F	F	A	I	D	G	E	F	S	G	I	S	D	G	P	S	V	T	A	L	T	S	G	F	D	T	P	E	E	R	Y	Q	K	L	K	K	H	S	M	D	F	L	L	F	Q	F	G	L	C	A	F	K	Y	D	H	T	D	S	K	H	V	T	K	S	F	N	F	Y	V	F	P	K	P	F	S	R	S	S	P
Template Known Secondary structure		S									S		S		S	S	S						S		S	S															T	T	B														S	S	S	S											B						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		59							60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.																									.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	D	W	N	V	R	T	H	T	A	S	G	L	V	.	E	R	V	K	A	S	T	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N
Query Conservation			.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		D	V	K	F	V	C	Q	S	S	S	I	D	F	L	A	S	Q	G	F	D	F	N	K	V	F	C	S	G	I	P	Y	L	N	Q	E	E	E	R	Q	L	R	E	T	K	E	Q	E	E	L	N	D	A	V	G	F	S	R	V	I	H	A	I	A	N	.	.	.	.	.	.	.	.	S	G	K	L	V	V	G	H
Template Known Secondary structure						B												T	T								T	T		B		B														G	G	G	T					S	B	T										.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.																.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	.	.	.	.	.	.	.	.	.	.	.	F	H	Y	R	Y	L	D	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	K	E	L	A	R	R	W	K	P	E	I	L	D	G	F	T	K	Q	G	T	.	H	Q	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		N	M	L	L	D	V	M	H	T	I	H	Q	F	Y	C	P	L	P	A	D	L	N	E	F	K	E	M	A	I	C	V	F	P	R	L	L	D	T	K	L	M	A	S	T	Q	P	F	K	D	I	I	N	N	T	S	L	A	E	L	E	K	R	L	K	E	T	P	F	D	P	P	K	V	E	S	A	E	H	E	A
Template Known Secondary structure		S													T					S	S													S									T	T	S	T	T						S			S								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	D	A	Y	I	T	G	L	C	F	I	S	M	A	N	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions