Job Description P0A784 Confidence 79.78% Date Thu Jan 5 11:05:03 GMT 2012 Rank 54 Aligned Residues 126 % Identity 17% Template c2hbkA_ PDB info PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p,2 reveals an interplay between the active site and the hrdc3 domain; protein in complex with mn Resolution 2.25 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		N	E	N	N	L	I	W	I	D	L	E	M	T	G	L	D	P	E	R	D	.	.	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	T	M	G
Query Conservation																						.	.
Alig confidence																						.	.								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	T	K	E	I	A	V	D	L	E	H	H	D	Y	R	S	Y	Y	G	I	V	C	L	M	Q	I	S	T	.	.	.	.	.	.	.	.	.	.	.	R	E	R	D	Y	L	V	D	T	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S											S	S	S	S	S											.	.	.	.	.	.	.	.	.	.	.	S	S							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.												.	260	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	F	H	Y	R	Y	L	D	V	S	T	L	K	E	L	A	R	R	W	K	P	E	I	L	D	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																						.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																						.	.	.	.
Template Sequence		L	R	E	N	L	H	I	L	N	E	V	F	T	N	.	.	.	.	P	S	I	V	K	V	F	H	G	A	F	M	D	I	I	W	L	Q	R	D	L	.	.	.	.	G	L	Y	V	V	G	L	F	D	T	Y	H	A	S	K	A	I	G	L	P	R	H	S	L	A	Y	L	L	E	N	F	A	N	F	K	T	S
Template Known Secondary structure		T	T	T	T	G	G	G	G					T		.	.	.	.	T	T	S					S	S													.	.	.	.					S	S												T		S			S
Template Predicted Secondary structure																.	.	.	.																						.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
													151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	F	T	K	Q	G	T	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	Y	Q	L	A	D	W	R	I	R	P	L	S	K	P	M	T	A	A	A	R	A	D	T	H	F	L	L	N	I	Y	D	Q	L	R	N	K
Template Known Secondary structure			T	T	T	T	S		T	T		S	S															T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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