Job Description P0A784 Confidence 96.83% Date Thu Jan 5 11:05:03 GMT 2012 Rank 43 Aligned Residues 112 % Identity 13% Template c2dtuA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the beta hairpin loop deletion variant2 of rb69 gp43 in complex with dna containing an abasic site3 analog Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																																												.
Query SS confidence																.	.	.	.	.	.																																																												.
Query Sequence		N	L	I	W	I	D	L	E	M	T	G	L	D	P	.	.	.	.	.	.	E	R	D	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	T	.
Query Conservation																.	.	.	.	.	.																																																												.
Alig confidence																.	.	.	.	.	.																				.	.	.																																						.
Template Conservation																																									.	.	.
Template Sequence		R	V	A	N	F	D	I	E	V	T	S	P	D	G	F	P	E	P	S	Q	A	K	H	P	I	D	A	I	T	H	Y	D	S	I	D	D	R	F	Y	.	.	.	V	F	D	L	L	N	S	P	Y	G	N	V	E	E	W	S	I	E	I	A	A	K	L	Q	E	Q	G	G	D	E	V	P	S	E	I	I	D	K
Template Known Secondary structure													S	S	S	S			T	T	T			S										T	T	T	T				.	.	.								T	T													S		G	G	G	T						T	T	T	G	G	G
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																.
Query SS confidence		.	.	.	.	.	.																																.
Query Sequence		.	.	.	.	.	.	M	G	D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	.	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E
Query Conservation		.	.	.	.	.	.																																.
Alig confidence		.	.	.	.	.	.																				.	.	.										.
Template Conservation																											.	.	.
Template Sequence		I	I	Y	M	P	F	D	N	E	K	E	L	L	M	E	Y	L	N	F	W	Q	Q	K	T	P	.	.	.	V	I	L	T	G	W	N	V	E	S	F	A	I	P	Y	V	Y	N	R	I	K	N	I	F
Template Known Secondary structure								S	S															T			.	.	.	S					S	S	T	T	T	T													S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions