Job Description P0A784 Confidence 99.96% Date Thu Jan 5 11:05:03 GMT 2012 Rank 15 Aligned Residues 166 % Identity 11% Template c1zbhA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		N	N	L	I	W	I	D	L	E	M	T	.	.	.	.	G	L	D	P	E	R	D	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	T	M	G
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																																							.	.	.	.	.
Template Conservation																																																							.	.	.	.	.
Template Sequence		D	Y	I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	.	.	.	.	.	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	A	D	T
Template Known Secondary structure		S													T	T			T	T															T	T	T											B			S	S	S		.	.	.	.	.	S																		T	S	B
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.
Predicted Secondary structure																			.																	.												.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																			.																	.												.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		D	R	E	A	E	L	A	T	L	E	F	L	K	Q	W	V	P	.	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	.	F	L	F	K	Y	M	P	E	L	E	A	.	.	.	Y	F	H	Y	R	Y	L	D	V	S	T	L	K	E	L	A	R	R	W	K	.	.	.	.	.	.	.	.	P	E	I
Query Conservation																			.																	.												.	.	.																					.	.	.	.	.	.	.	.
Alig confidence																			.																	.												.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	Q	V	L	K	K	V	I	D	L	M	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	S	W	D	M	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	P	F	A	K	K	W	I	N	I	R	K	S	Y	G	N	F	Y	K	V	P	R	S	Q	T	K	L	T	I	M	L	E
Template Known Secondary structure																T	T	B	T	T	T	B							S	S	S					T									T	T	B				G	G	G	S														T			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		149	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	D	G	F	T	K	Q	G	T	.	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		K	L	G	M	D	Y	D	G	R	P	N	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	M	L	Q
Template Known Secondary structure			T	T					S		T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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