Job Description P0A784 Confidence 98.34% Date Thu Jan 5 11:05:03 GMT 2012 Rank 27 Aligned Residues 129 % Identity 10% Template c1njzA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase i; PDBTitle: cytosine-thymine mismatch at the polymerase active site Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	N	L	I	W	I	D	L	E	M	T	G	L	D	P	E	R	D	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	T	M	G	D	R	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	D	K	A	A	L	V	V	E	V	V	E	E	N	Y	H	D	A	P	I	V	G	I	A	V	V	N	.	.	.	.	.	.	.	.	.	E	H	G	R	F	F	L	R	P	E	T	A	L	A	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S										S	S	S		T	T											.	.	.	.	.	.	.	.	.	T	T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	F	H	Y	R	Y	L	D	V	S	T	L	K	E	L	A	.	.	.	.	R	R	W	K	P	E	I	L	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.									.	.	.	.																				.	.	.	.																				.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.									.	.	.	.																				.	.	.	.
Template Sequence		.	.	.	Q	F	V	A	W	L	G	D	.	.	.	.	E	T	K	K	K	S	M	F	D	S	K	R	A	A	V	A	L	K	W	.	.	.	.	K	G	I	E	L	C	G	V	S	F	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V	A	A	A	A	K	M	K	Q	Y	E	A	V	R	P
Template Known Secondary structure		.	.	.									.	.	.	.	T	T	S					S	S											.	.	.	.	T	T																			G	G	G				S							T	T	T			S	S
Template Predicted Secondary structure		.	.	.									.	.	.	.																				.	.	.	.
Template SS confidence
					356	.	.	.	360	.	.	.					.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
															151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	K	Q	G	T	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H	F	I	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	A	V	Y	G	K	G	A	K	R	A	V	P	D	E	P	V	L	A	E	H	L	V	R	K	A	A	A	I	W	E	L	E	R	P	F	L	D	E	L	R	R
Template Known Secondary structure								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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