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Job DescriptionP27859
Confidence99.10%DateThu Jan 5 11:44:22 GMT 2012
Rank58Aligned Residues237
% Identity16%Templated3be7a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Zn-dependent arginine carboxypeptidase-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........ 10.........20.........30.........40.........50.........60.......
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Query Sequence  MFDIGVNLT. . . . . . . . . . . . . SSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSS
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Template Sequence  LMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALG
Template Known Secondary structure 

SS



SGGGTT

TTTT


STTTTSS




S
BB
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   58.60.........70.........80.........90.........100.........110.........120.........130.......
 
   68.70 .........80.........90.........100.........110.........120.
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Query Sequence  QWQ. . . . . . . . . . . . . . . . . . . . . . . . . . AATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLN
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Template Sequence  ITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHG
Template Known Secondary structure 
TTSTTS


S
TTT



TTB

STT
S
B

SSSSS

TTSB
S
TT
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   122.......130.........140.........150.........160.........170.........180
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Query Sequence  MPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDE. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  MKVAAHAHGLIGIKAAIKAGVD. . . . . SVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLV
Template Known Secondary structure 

ST
S.....
TT

TT



STTTTTTTT

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   218.220.........230......... 240.........250.........260.........270.........280.........290..
 
   181........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  . . RRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI
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Template Sequence  GKKQRENFMNAHRRGA. . IITFGTDAGIFDHGD. . . . . . . . . . . . . . NAKQFAYMVEW. GMTPLEAIQASTIKTATLFGI
Template Known Secondary structure  T
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BTTB
TT
..............GGGT.T

TTTT
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   293......300........ .310.........320... ......330.... .....340.........350.....
 
   259
Predicted Secondary structure 
Query SS confidence 
Query Sequence  A
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   356
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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