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Job DescriptionP27859
Confidence99.21%DateThu Jan 5 11:44:22 GMT 2012
Rank49Aligned Residues239
% Identity11%Templated2imra2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases DR0824-like
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.........50.......
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Query Sequence  MFDIGVNLTSS. . . . . . . . . . . . . . . . . . . . . . . QFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWS
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Template Sequence  PVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWAPEVMDALLAREDLSGTLYF
Template Known Secondary structure 

SS


TSTT

TT



ST
TT

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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  TAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMT
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Template Sequence  EVLNPFPDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVS. . . . HRLMRLLSDYAAGEGLPLQIHVAEHPTELEM
Template Known Secondary structure 
B

GGGTT
BTT

SSSB
....T

BS
S
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   173......180.........190.........200.........210....... ..220.........230.........240........
 
   138.140.... .....150.........160.........170..... ..
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Query Sequence  LLEPWLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KLPGAVLHCFTGTREEMQACVAHGIYIGITG. . WV
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Template Sequence  FRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNH
Template Known Secondary structure  S
STTGGGS
GGGS
SSTS


TT

T
GGG



S

T


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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   178.180.........190.........200.........210.........220.........230....... ..240.........250......
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Query Sequence  CDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWR. GEDAAWLAATTDANVKTLF
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Template Sequence  HLECGTFDWPAFAAAGV. . EVALGTDSVASGETLN. . . . . . . . . . . . . VREEVTFARQLYPGLDPRVLVRAAVKGGQRVV
Template Known Secondary structure  TT




TT
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S
S
.............T
TTS
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   329330.........340..... ....350.........360. ........370.........380.........390...
 
   257.
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Query Sequence  GI
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Template Conservation 

Template Sequence  GT
Template Known Secondary structure 

Template Predicted Secondary structure 

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   394.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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