Job Description P27859 Confidence 98.81% Date Thu Jan 5 11:44:22 GMT 2012 Rank 72 Aligned Residues 238 % Identity 14% Template d1yrra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.00

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		1	.	.	.	.	.	.							.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																		.
Predicted Secondary structure									.	.	.	.	.	.						.	.	.																						.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.						.	.	.																						.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	.	.	.	.	.	.	L	T	S	S	Q	.	.	.	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	.	.	I	T	G	T	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation									.	.	.	.	.	.						.	.	.																						.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.						.	.	.																						.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W
Template Known Secondary structure								S			T	T			S	S	S	S	T	T	T	S	S														T	T																															T	T	S	B								S	S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H
Query Conservation
Alig confidence								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		L	N	L	V	K	K	.	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	M	V	P	A	.	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S	N	A	T
Template Known Secondary structure					S			.				S		S															T	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S			.									T	T							S
Template Predicted Secondary structure								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		135	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.															.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.									.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	.	.	.	.	.	.	.	.	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																.	.	.								.	.	.	.	.	.	.	.																		.																					.
Template Conservation																.	.	.																																	.																					.
Template Sequence		L	K	E	A	K	A	G	F	R	A	G	I	T	F	.	.	.	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	.	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	.	D	K	L	C	L	V	T	D	A
Template Known Secondary structure												T				.	.	.		S	S	T	T	T	T	S					S	S												T	T						.			S	S	S	S	S													G	.	G	G							B
Template Predicted Secondary structure																.	.	.																																	.																					.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E
Template Known Secondary structure			T	T	T	T	S			S					T	T							S	S					T	T						B																											T							T	T		T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions