Job Description P27859 Confidence 98.86% Date Thu Jan 5 11:44:22 GMT 2012 Rank 66 Aligned Residues 242 % Identity 14% Template d1un7a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.05

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		1	.	.	.	.	.	.						.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure									.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	.	.	.	.	.	L	T	S	S	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	.	.	T	G	T	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	D	I	H	I	H	G	G	Y	G	A	D	T	M	D	A	S	F	S	T	L	D	I	M	S	S	R	L	P	E	E	G	T	T	S	F	L	A	T	T	I	T	Q	E	H	G	N	I	S	Q	A	L	V	N	A	R	E	W	K	A	A	E	E	S	S	L	L	G	A	E	L	L	G	I	H	L	E	G	P
Template Known Secondary structure											T	T			G	G	G		S											G	G	G	G	T										S																					S	G	G	G	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	S	P	K	R	A	G	A	Q	P	K	E	W	I	R	P	S	D	V	E	L	F	K	K	W	Q	Q	E	A	G	G	L	I	K	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	E	E	D	Q	H	F	E	L	I	R	H	L	K	D	E	S	I	I	A	S	M	G	H	T	D	A
Template Known Secondary structure		S	S		G	G	G		T	T	S		G	G	G																T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	G	G	G									T	T							S	B
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.									.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	.	.	.	.	.	.	.	.	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																	.	.	.								.	.	.	.	.	.	.	.																		.
Template Conservation																	.	.	.																																	.
Template Sequence		D	S	A	L	L	S	D	A	A	K	A	G	A	S	H	.	.	.	M	T	H	L	Y	N	A	M	S	P	F	H	H	R	E	P	G	V	I	G	T	A	L	A	H	D	G	F	V	T	E	L	.	I	A	D	G	I	H	S	H	P	L	A	A	K	L	A	F	L	A	K	G	S	S	K	L	I	L	I	T	D
Template Known Secondary structure												T	T				.	.	.		S	S	T	T	S	S	B					S	S	S											T	T						.			S	S	S	S	S														T	T	S
Template Predicted Secondary structure																	.	.	.																																	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	R	A	K	G	L	K	D	G	V	Y	E	F	G	G	Q	S	V	T	V	R	G	R	T	A	L	L	S	D	G	T	L	A	G	S	I	L	K	M	N	E	G	A	R	H	M	R	E	F	T	N	C	S	W	T	D	I	A	N	I	T	S	E	N	A	A	K	Q	L	G	I	F
Template Known Secondary structure		B		T	T	T	T	S		S						T	T							T	T					T	T	S		B		S	B																											T								T		T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions