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Job DescriptionP27859
Confidence99.16%DateThu Jan 5 11:44:22 GMT 2012
Rank55Aligned Residues237
% Identity14%Templated1p1ma2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases SAH/MTA deaminase-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MFDIGVNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . TSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQ
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Template Sequence  LFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYFHEEWIAKAVRDFGM
Template Known Secondary structure 
GGGGGGTTSS
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TTTT

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   51........60.........70.........80.........90.........100.........110.........120.........130
 
   52.......60.........70.........80.........90.........100.........110.........120........ .
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Query Sequence  YSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC. . R
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Template Sequence  RALLTRGLVDSNGDDGGRLEENLKLYNEWNGFEGRIFVGFG. . . . . . PHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYET
Template Known Secondary structure 

BTTB
TTTTGGGT......

TTTS
TT

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   131........140.........150.........160.........170. ........180.........190.........200....
 
   130.........140.... .....150.........160.........170....... ..180.........190.........200......
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Query Sequence  DAHERFMTLLEPWLD. KLPGAVLHCFTGTREEMQACVAHGIYIGITGWV. . CDERRGLELRELLPLIPAEKLLIETDAPY
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Template Sequence  SKEEYDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRMIEHGM. . KVTLGTDGA.
Template Known Secondary structure  TT



TTTTTTTS

TT

GGGTTTTTTSS
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TT
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   205....210.........220.........230.........240.........250.........260.........270.. .......280.
 
   207..210.........220.........230...... ...240.........250........
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Query Sequence  LLPRDLTPKPSSRRNEPAHLPHILQRIAHW. . . . . . RGEDAAWLAATTDANVKTLFGI
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Template Sequence  . . . . . . . . . . . . ASNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGF
Template Known Secondary structure  ............TTTS


TT
TTSS
TT
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   282.......290.........300.........310.........320.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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