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Job DescriptionP27859
Confidence100.00%DateThu Jan 5 11:44:22 GMT 2012
Rank2Aligned Residues258
% Identity50%Templatec3rcmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tatd family hydrolase; PDBTitle: crystal structure of efi target 500140:tatd family hydrolase from2 pseudomonas putida
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50..... ....60.........70......
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Query Sequence  MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSC. . . . WSTAGVHPHDSSQWQAATEEA
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Template Sequence  LIDIGVNLTNSSFHDQQAAIVERALEAGVTQXLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQ
Template Known Secondary structure 
TT
GGGTT
TT


S
TTSSS


GGGGGG

TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  IIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTG
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Template Sequence  LRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDYRDHLTGAVVHCFTG
Template Known Secondary structure  TSTTTTT
SS
T

S
TTGGG
S

S


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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  TREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHW
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Template Sequence  EREALFAYLDLDLHIGITGWICDERRGTHLHPLVGNIPEGRLXLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALH
Template Known Secondary structure 
TT

GGGG
TTT
GGGTTS
TTS


TTS


TT
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TT



GGG
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   237..240.........250........
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Query Sequence  RGEDAAWLAATTDANVKTLFGI
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Template Sequence  RGESAEHTAAHTTATARDFFQL
Template Known Secondary structure  TS
TT
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   243......250.........260....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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