Job Description P27859 Confidence 99.65% Date Thu Jan 5 11:44:22 GMT 2012 Rank 38 Aligned Residues 245 % Identity 15% Template c3pnuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	.	.	.	.	.	.	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	Y	S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E
Query Conservation																																							.	.	.	.	.	.
Alig confidence												.	.	.	.																								.	.	.	.	.	.																																	.	.	.	.
Template Conservation												.	.	.	.																																																														.	.	.	.
Template Sequence		P	L	D	M	H	L	H	L	R	D	.	.	.	.	N	Q	M	L	E	L	I	A	P	L	S	A	R	D	F	C	A	A	V	I	M	P	N	L	I	P	P	L	C	N	L	E	D	L	K	A	Y	K	M	R	I	L	K	A	C	K	D	E	N	F	T	P	L	M	T	L	F	F	K	N	Y	.	.	.	.	D
Template Known Secondary structure											S	.	.	.	.													T	T		S									S	S				S																T	T	S							B				S			.	.	.	.
Template Predicted Secondary structure												.	.	.	.																																																														.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	.	.	.	.	.	.	.	.	.	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	F	L	Y	S	A	K	D	E	I	F	G	I	L	Y	P	A	G	I	T	T	N	S	N	G	G	V	S	S	F	D	I	E	Y	L	K	P	T	L	E	A	M	S	D	L	N	I	P	L	L	V	H	G	E	T	N	D	F	V	M	D	R	E	S	N	F	A	K	I	Y	E	K	L	A	K	H	F	P	R
Template Known Secondary structure									T	T	T		S	B				B	T	T	S	S	S	S		T	T	S	B																		T	T										S	S		G	G	G	T	T	G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	A	V	L	H	C	F	T	G	T	R	E	E	M	Q	A	C	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	I	Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																																													.
Template Sequence		L	K	I	V	M	E	H	I	T	T	K	T	L	C	E	L	L	K	D	Y	E	N	L	Y	A	T	I	T	L	H	H	L	I	I	T	L	D	D	V	I	G	G	K	M	N	P	H	L	F	C	K	P	I	A	K	R	Y	E	D	K	E	A	L	C	E	L	A	F	S	G	Y	E	K	V	M	.	F	G	S	D
Template Known Secondary structure		S						S			S											T	T							S	G	G	G	T								T	S	S			G	G	G			S	S																	T	T		T	T			.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I	A	F
Query Conservation
Alig confidence									.	.	.	.																						.	.
Template Conservation									.	.	.	.																						.	.
Template Sequence		S	A	P	H	P	K	G	.	.	.	.	C	A	A	G	V	F	S	A	P	V	I	L	P	V	L	A	E	L	F	K	Q	.	.	N	S	S	E	E	N	L	Q	K	F	L	S	D	N	T	C	K	I	Y	D	L	K	F
Template Known Secondary structure		B				B			.	.	.	.			S		B			G	G	G												.	.		S										T								T
Template Predicted Secondary structure									.	.	.	.																						.	.
Template SS confidence
		238	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions