Return to main results Retrieve Phyre Job Id

Job DescriptionP27859
Confidence97.94%DateThu Jan 5 11:44:22 GMT 2012
Rank119Aligned Residues239
% Identity16%Templatec3mduA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:n-formimino-l-glutamate iminohydrolase; PDBTitle: the structure of n-formimino-l-glutamate iminohydrolase from2 pseudomonas aeruginosa complexed with n-guanidino-l-glutamate
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20.........30.......
Predicted Secondary structure 

.................................










..........
Query SS confidence 






. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





























. . . . . . . . . .
Query Sequence  MFDIGVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTSSQFAKDRDDVVACAFDAGVNGLLITGT. . . . . . . . . .
Query Conservation 


 
 
.................................
            
      

   
    ..........
Alig confidence 






.................................





























..........
Template Conservation 


 
 
                                                     
 
                 
Template Sequence  MPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSY
Template Known Secondary structure 
GGGGGGTTTT


SSTT

TT

T


S
TTS


Template Predicted Secondary structure 
















































Template SS confidence 















































































   52.......60.........70.........80.........90.........100.........110.........120.........130.
 
   38.40.........50.........60....... ..70.........80.........90.........100..
Predicted Secondary structure  ..













.............

















Query SS confidence  . .





























. . . . . . . . . . . . .


































Query Sequence  . . NLRESQQAQKLARQYSSCWSTAGVHPHDSS. . . . . . . . . . . . . QWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST
Query Conservation  ..                              .............         
            
  

        
Alig confidence  ..





























.............


































Template Conservation                   
                                                              
Template Sequence  ADPAELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAV
Template Known Secondary structure  SSTTT

B

BSSTTT
B

GGGGGG


T

TTTS
Template Predicted Secondary structure 



































Template SS confidence 















































































   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   103......110.........120.........130.........140.... .....150.........160.........170
Predicted Secondary structure 








............










Query SS confidence 









































. . . . . . . . . . . .

























Query Sequence  PEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLD. . . . . . . . . . . . KLPGAVLHCFTGTREEMQACVAHGIY
Query Conservation                
     

 

           
    
............    
  
   
              
Alig confidence  ....





































............

























Template Conservation  ....          
   
                                          
               
  
Template Sequence  . . . . TPQQIATVLAAGHDDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAV
Template Known Secondary structure  ....
TSS
TTS
S
SSS
S


TT

S

T
Template Predicted Secondary structure  ....




























Template SS confidence 















































































   212.......220.........230.........240.........250.........260.........270.........280.......
 
   171... .....180.........190.........200.........210.........220.........230.......
Predicted Secondary structure 
..





























...........
Query SS confidence 



. .






























































. . . . . . . . . . .
Query Sequence  IGIT. . GWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWR. . . . . . . . . . .
Query Conservation      ..                     



 


 
                 
  
           ...........
Alig confidence 



..



















..








.............


















...........
Template Conservation                          

.. 
  


  .............                              
Template Sequence  AGLCLSTEANLGDGIFPATDFLAQGG. . RLGIGSDSH. . . . . . . . . . . . . VSLSVVEELRWLEYGQRLRDRKRNRLYRDD
Template Known Secondary structure 
TT




TT
..

BT
.............S


T
S

S
BTT
Template Predicted Secondary structure 











..



.............







Template SS confidence 















































































   288.290.........300.........310... ......320.. .......330.........340.........350..
 
   238.240.........250........
Predicted Secondary structure  .




Query SS confidence  .




















Query Sequence  . GEDAAWLAATTDANVKTLFGI
Query Conservation  .


 
    
   

 




Alig confidence  .




















Template Conservation   


  


   
  

  


Template Sequence  QPMIGRTLYDAALAGGAQALGQ
Template Known Secondary structure  B

TS
Template Predicted Secondary structure 





Template SS confidence 





















   353......360.........370....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions