Job Description P27859 Confidence 99.88% Date Thu Jan 5 11:44:22 GMT 2012 Rank 32 Aligned Residues 230 % Identity 17% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																							.	.	.	.	.	.																													.	.	.	.
Query SS confidence																				.	.																							.	.	.	.	.	.																													.	.	.	.
Query Sequence		V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	.	.	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	Y	S	S	C	W	S	T	A	G	.	.	.	.	.	.	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	.	.	.	.
Query Conservation																				.	.																							.	.	.	.	.	.																													.	.	.	.
Alig confidence																				.	.																							.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	T	C	R	G	I	G	R	D	P	V	K	L	R	R	I	S	A	E	T	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D	E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R
Template Known Secondary structure								T	T										B	T	T	T																						S	B			G	G	G			G	G	G	G	T																T		B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
					89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.			.	.	.
Predicted Secondary structure		.	.	.																																										.	.	.																							.						.	.
Query SS confidence		.	.	.																																										.	.	.																							.						.	.
Query Sequence		.	.	.	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	.	.	.	D	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	.	H	C	F	T	G	.	.	T	R	E
Query Conservation		.	.	.																																										.	.	.																							.						.	.
Alig confidence		.	.	.								.	.	.	.																															.	.	.																							.						.	.
Template Conservation												.	.	.	.
Template Sequence		I	G	L	I	G	E	I	G	V	S	.	.	.	.	S	D	F	T	A	E	E	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V	L	C	H	X	N	P	S	H	X	D	P	V
Template Known Secondary structure			S	S								.	.	.	.	T	T																													T	T	S													T	T			G	G	G							G	G	G	T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.														.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	R	N	E	P	A	H	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		Y	Q	A	T	L	A	Q	R	G	A	F	L	E	F	D	X	I	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y	G	G	.	.	.	.	N	G	Y	A	F	V	T
Template Known Secondary structure										T								T	T						T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G	T	S	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I	A
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		K	H	F	L	P	R	L	R	R	.	H	G	L	D	D	A	A	L	E	T	L	X	V	T	N	P	R	R	V	F	D	A	S
Template Known Secondary structure											.	T	T											T									T	T
Template Predicted Secondary structure											.
Template SS confidence
		322	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions