Job Description P27859 Confidence 99.68% Date Thu Jan 5 11:44:22 GMT 2012 Rank 37 Aligned Residues 243 % Identity 19% Template c3jzeC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																							.	.	.	.	.	.															.	.
Query SS confidence																																							.	.	.	.	.	.															.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	.	.	.	.	.	.	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	.	.	Y	S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A
Query Conservation																																							.	.	.	.	.	.															.	.
Alig confidence												.	.	.	.																								.	.	.	.	.	.															.	.
Template Conservation												.	.	.	.
Template Sequence		P	D	D	W	H	V	H	L	R	D	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	S	P	I	T	T	V	D	A	A	I	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	A	D
Template Known Secondary structure											S	.	.	.	.													T	T		S								S	S	S				S															S		T	T													T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.
Predicted Secondary structure																											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	.	.	.	.	.	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R
Query Conservation																											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.									.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		E	L	E	R	G	F	H	E	.	.	.	.	.	.	.	.	.	G	V	F	T	A	A	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	V	D	A	I	M	P	V	L	E	R	M	E	K	L	G	I	P	L	L	V	H	G	E	V	T	H	A	D	V	D	I	F	D	R	E	A	R	F	I	D	T
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	T	S							B	T	T	S	S	T	T		T	T	S	B	S		T	T	T	T											T												T	T	S		G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	Q	Y	V	R	D	G	N	D	Y	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	D	M	L	V	G	G	I	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A
Template Known Secondary structure		T								S	T	T							S			S										S		T	T																			T	T	S			G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		195	.	.	.			.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.						.														.
Query SS confidence						.	.						.														.
Query Sequence		A	E	K	L	.	.	L	I	E	T	D	.	A	P	Y	L	L	P	R	D	L	T	P	K	P	.	S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I
Query Conservation						.	.						.														.
Alig confidence						.	.						.														.																				.	.
Template Conservation																																															.	.
Template Sequence		S	G	F	T	R	A	F	L	G	T	D	S	A	P	H	S	R	H	R	K	E	T	S	C	G	C	A	G	C	F	N	A	P	S	A	L	G	S	Y	A	A	V	F	E	E	.	.	M	N	A	L	A	H	F	E	A	F	C	S	L	N	G	P	Q	F	Y	G	L
Template Known Secondary structure		T	T		T	T							B				B					S	S	S	S								T	T	T												.	.	T	T		G	G	G							T							T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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