Job Description P27859 Confidence 98.14% Date Thu Jan 5 11:44:22 GMT 2012 Rank 116 Aligned Residues 256 % Identity 9% Template c3griB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: the crystal structure of a dihydroorotase from staphylococcus aureus Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure													.	.																											.	.	.	.	.	.
Query SS confidence													.	.																											.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	.	.	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	.	.	.	.	.	.	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	Y	S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A
Query Conservation													.	.																											.	.	.	.	.	.
Alig confidence													.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	D	V	H	V	H	L	R	E	P	G	G	E	Y	K	E	T	I	E	T	G	T	K	A	A	A	R	G	G	F	T	T	V	C	P	X	P	N	T	R	P	V	P	D	S	V	E	H	F	E	A	L	Q	K	L	I	D	D	N	A	Q	V	R	V	L	P	Y	A	S	I	T	T	R	Q	L	G	K	E	L
Template Known Secondary structure											T	T	T		T	T	T													T	T								S		S	S	S		S		S																S	S								S	B	G	G	G		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																																										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	F	P	A	L	V	K	E	G	A	F	A	F	T	D	D	G	V	G	V	Q	T	A	S	X	X	Y	E	G	X	I	E	A	A	K	V	N	K	A	I	V	A	H	C	E	D	N	S	L	I	Y	G	G	A	X	H	E	G	K	R	S	K	E	L	G	I	P	G	I	P	N	I	C	E	S	V	Q	I	A
Template Known Secondary structure									T	T	T								S	S				S														T	T										G	G	G		T	T		S			S	S							T						T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	V	L	L	A	E	A	A	G	C	H	Y	H	V	C	H	V	S	T	K	E	S	V	R	V	I	R	D	A	K	R	A	G	I	H	V	T	A	E	V	T	P	H	H	L	L	L	T	E	D	D	I	P	G	N	N	A	I	Y	K	X	N	P	P	L	R	S	T	E	D	R	E	A	L	L	E	G	L	L
Template Known Secondary structure											T							S																T	T																G	G	G			S	S		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	L	T	.	.	.	.	P	K	P	S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G	I
Query Conservation																								.	.	.	.
Alig confidence					.	.																		.	.	.	.
Template Conservation					.	.
Template Sequence		D	G	T	.	.	I	D	C	I	A	T	D	H	A	P	H	A	R	D	E	K	A	Q	P	X	E	K	A	P	F	G	I	V	G	S	E	T	A	F	P	L	L	Y	T	H	F	V	K	N	G	D	W	T	L	Q	Q	L	V	D	Y	L	T	I	K	P	C	E	T	F	N	L
Template Known Secondary structure			T	S	.	.	S							B									S	S		T	T	T	S							T	T	T										T	T	S	S	S											T								T
Template Predicted Secondary structure					.	.
Template SS confidence
		294	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions