Job Description P27859 Confidence 98.83% Date Thu Jan 5 11:44:22 GMT 2012 Rank 69 Aligned Residues 237 % Identity 14% Template c3fdgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidase ac. metallo peptidase. merops family m19; PDBTitle: the crystal structure of the dipeptidase ac, metallo peptidase. merops2 family m19 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20														.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																							40	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	A	K	D	R	D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	S	Q	Q	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	D	G	H	N	D	F	L	L	R	L	L	R	N	P	A	N	R	E	T	I	W	L	K	G	D	G	T	G	H	L	D	L	P	R	M	K	E	G	G	F	A	G	G	F	F	A	I	Y	V	P	S	P	P	F	E	L	P	L	P	P	M	I	R	A	E	Q	A	Q	P	V	A	L	A	M	A	G	H	L
Template Known Secondary structure																	G	G	G							T			S		S	S										T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		46	.	.	.	50	.	.	.	.	.																				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query Sequence		Q	K	L	A	R	Q	Y	S	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		L	W	M	E	R	A	A	R	G	R	F	K	V	C	R	T	A	A	E	V	R	S	C	H	A	D	G	I	V	S	G	I	M	H	M	E	G	A	E	A	I	G	A	D	L	D	A	L	H	L	F	H	S	L	.	.	.	.	.	.	.	.	.	G	L	R	S	L	G	P	V	W	S	R	P	T	V	F	G	H
Template Known Secondary structure									T	T	S						S											T										S		T	T	S		T	T											.	.	.	.	.	.	.	.	.	T						S		S	S	S			S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.										.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	T	R	.	.	.	.	.	.	.	.	.	E	E	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																						.																.	.
Template Sequence		G	V	P	F	R	F	P	G	S	P	D	T	G	E	G	L	T	E	A	G	R	R	L	V	A	E	C	N	R	L	K	I	M	L	D	L	.	S	H	L	N	E	K	G	F	D	D	V	A	R	L	S	.	.	D	A	P	L	V	A	T	H	S	N	A	H	A	V	T	P	S	T	R	N	L	T	D	R	Q	L
Template Known Secondary structure		B						S			S			S																		T						.	T	T	B													.	.	S	S					S	S			B	T	T	T	S			T	T	S	B
Template Predicted Secondary structure																																						.																.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	R	N	E	P	A	H	L	P	H
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		A	M	I	R	E	S	R	G	M	V	G	L	N	F	A	T	S	F	L	R	E	D	G	R	R	S	A	E	M	G	W	E	P	V	L	R	H	L	D	H	L	I	D	R	L	G	E	D	H	V	G	M	G	S	D	F	.	.	.	.	.	.	.	D	G	A	T	I	P	Q	G	I	A	D	V	T	G	L	P	A
Template Known Secondary structure							T	T													S	T	T									S																T	T	S							B	.	.	.	.	.	.	.	T	T	S				T	T	T		S	G	G	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.								.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	Q	A	A	M	R	A	.	H	G	Y	D	E	P	L	M	R	K	L	C	H	E	N	W	Y	G	L	L	E
Template Known Secondary structure									.		T											T
Template Predicted Secondary structure									.
Template SS confidence
		323	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions