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Job DescriptionP27859
Confidence98.19%DateThu Jan 5 11:44:22 GMT 2012
Rank113Aligned Residues240
% Identity14%Templatec3etkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus furiosus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1......
Predicted Secondary structure 

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Query Sequence  MFDIGVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FFDSHLHLDELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMN
Template Known Secondary structure 
TS
TT

ST

SSS
TS


TTSSS
TTSS
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   8.10.........20.........30.........40.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLA
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Template Sequence  SKMIDLLNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELE
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TTTTTTTTS
TT
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   50.........60.........70.........80.........90.........100.... .....110.
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Query Sequence  RQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPE. . . . . . . . . . . . . . . . . . EQERAFV
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Template Conservation         ....                                                                     
Template Sequence  REGRLKM. . . . NVFAYLSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIV
Template Known Secondary structure  TT


S....
GGGT

S
SSS


TTTT
S

SS
BTTBTT




SS
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   255....260. ........270.........280.........290.........300.........310.........320.........330
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  AQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLP
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Template Sequence  EVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDWWIVNRVGEE
Template Known Secondary structure  GGGT

STT




B

T

T
TT
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   331........340.........350.........360.........370.........380.........390.........400.........410
 
   192.... ...200.........210.........220.........230.... .....240.........250......
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Query Sequence  LIPAE. . . . . . . . . . KLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIA. . . . . HWRGEDAAWLAATTDANVKTLF
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Template Sequence  RAKWAYRLKTLSSITKLGFSTDSPIEPA. . . . . . . . . . . . . . DPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVT
Template Known Secondary structure  GGGB

S


TTTTS

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SS
GGG


TTT
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   411........420.........430........ .440.........450.........460.........470......
 
   257.
Predicted Secondary structure 

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Query Sequence  GI
Query Conservation 

Alig confidence 

Template Conservation 

Template Sequence  LA
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 

   477.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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