Job Description P27859 Confidence 100.00% Date Thu Jan 5 11:44:22 GMT 2012 Rank 8 Aligned Residues 256 % Identity 32% Template c3e2vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3'-5'-exonuclease; PDBTitle: crystal structure of an uncharacterized amidohydrolase from2 saccharomyces cerevisiae Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	.	.	.	.	.	.	.	.	.	.	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	Y	S	S	.	.	.	.	.	C	W	S	T	A	G	V	H	P	H	D
Query Conservation															.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	D	I	G	L	N	L	T	D	P	M	F	H	G	I	Y	N	G	K	Q	Y	H	P	A	D	Y	V	K	L	L	E	R	A	A	Q	R	H	V	K	N	A	L	V	T	G	S	S	I	A	E	S	Q	S	A	I	E	L	V	S	S	V	K	D	L	S	P	L	K	L	Y	H	T	I	G	V	H	P	C	C
Template Known Secondary structure									T	T	S	G	G	G	G	T			T	T				S														T	T										S															T	T	T		S	S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		66	.	.	.	70																			.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																.																				.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																.																				.	.	.
Query Sequence		S	S	Q	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	T	E	E	A	I	I	E	L	A	A	Q	.	.	.	.	.	.	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	.	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																.																				.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																.																				.	.	.
Template Conservation
Template Sequence		V	N	E	F	A	E	A	Y	N	E	S	L	Y	A	K	V	I	S	N	P	S	F	A	Q	G	K	L	K	E	L	Y	D	L	M	N	Q	Q	A	K	P	H	D	T	S	F	R	S	I	G	E	I	G	L	D	Y	D	R	F	H	Y	S	S	K	E	M	Q	K	V	F	F	E	E	Q	L	K	I	S	C	L	N
Template Known Secondary structure		G	G	G	G																T																				S	T	T		S											T	T		T	T	T	S																T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
			118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	E	R	F	M	T	L	L	E	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	K	L	P	G	A	V	L	H	C	F	T	G	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G
Query Conservation		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	L	S	S	Y	P	L	F	L	H	M	R	S	A	C	D	D	F	V	Q	I	L	E	R	F	V	V	G	F	T	D	E	K	D	T	F	Q	L	Q	K	L	S	S	S	S	G	F	Y	K	F	H	P	D	R	K	L	V	V	H	S	F	T	G	S	A	I	D	L	Q	K	L	L	N	L	S	P	N	I	F
Template Known Secondary structure						T	S								S																			S	S		T	T		G	G	G				T	T							T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	L	T	P	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		I	G	V	N	G	.	C	S	L	R	T	E	E	N	L	A	V	V	K	Q	I	P	T	E	R	L	L	L	E	T	D	A	P	W	C	E	I	K	R	T	H	A	S	F	Q	Y	L	A	K	Y	Q	E	V	R	D	F	E	Y	P	A	F	K	S	V	K	K	N	K	L	A	D	K	L	N	A	E	E	L	Y	M
Template Known Secondary structure						G	.	G	G	G	S	S									T	S		G	G	G							T	T	S					T	T	S	T	T											S				S	S	S	S					G	G	G	S	G	G	G	T	T	S	S	S
Template Predicted Secondary structure							.
Template SS confidence
		298	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	G	R	N	E	P	C	N	M	E	Q	V	A	I	V	V	S	E	V	K	D	V	D	L	A	T	L	I	D	T	T	W	K	T	T	C	K	I	F	G
Template Known Secondary structure			T	T				G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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