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Job DescriptionP27859
Confidence97.60%DateThu Jan 5 11:44:22 GMT 2012
Rank131Aligned Residues236
% Identity14%Templatec3be7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10.........20.........30.........40.........50.........60.......
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Query Sequence  MFDIGVNL. . . . . . . . . . . . . TSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSS
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Template Sequence  LMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALG
Template Known Secondary structure 

SS



SGGGTT

TTTT


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S
BB
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   58.60.........70.........80.........90.........100.........110.........120.........130.......
 
   68.70 .........80.........90.........100.........110.........120.
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Query Sequence  QWQ. . . . . . . . . . . . . . . . . . . . . . . . . . AATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLN
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Template Sequence  ITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHG
Template Known Secondary structure 
TTSTTS


S
TTT



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ST
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B

SSSSS

TTSB
S
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   122.......130.........140.........150.........160.........170.........
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Query Sequence  MPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCD. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  MKVAAHA. . HGLIGIKAAIKAGVD. . . SVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLV
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ST
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T



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   218.220.... .....230......... 240.........250.........260.........270.........280.........290..
 
   180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  . ERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI
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Template Sequence  GKKQRENFMNAHRRGA. . IITFGTDAGIFDHGD. . . . . . . . . . . . . . NAKQFAYMVEW. GMTPLEAIQASTIKTATLFGI
Template Known Secondary structure  T
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BTTB
TTG..............GGGT.T

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   293......300........ .310.........320... ......330.... .....340.........350.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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