Phyre 2 alignment of P27859 with c2z00A

Job Description P27859
Confidence 97.92% Date Thu Jan 5 11:44:22 GMT 2012

Rank 121 Aligned Residues 244

% Identity 16% Template c2z00A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of dihydroorotase from thermus thermophilus

Resolution 2.42 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.	.																												.	.	.	.	.	.	.
Query SS confidence												.	.																												.	.	.	.	.	.	.
Query Sequence	M	F	D	I	G	V	N	L	T	S	S	.	.	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	.	.	.	.	.	.	.	L	R	E	S	Q	Q	A	Q	K	L	A	R	Q	Y	S	S	C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A
Query Conservation												.	.																												.	.	.	.	.	.	.
Alig confidence												.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence	F	L	D	L	H	A	H	L	R	E	P	G	E	E	V	K	E	D	L	F	S	G	L	L	A	A	V	R	G	G	Y	T	D	L	V	S	X	P	N	T	K	P	P	V	D	T	P	E	A	V	R	A	L	K	E	K	A	K	A	L	G	L	A	R	L	H	P	A	A	A	L	T	E	K	Q	E	G	K	T	L
Template Known Secondary structure										T	T	T		T	T	T													T	T								S		S	S	S		S		S															T	S	S								S	B	G	G	G		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
	51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

	72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	T	P	A	G	L	L	R	E	A	.	.	.	.	.	.	.	.	.	.	.	.	G	A	V	L	L	T	D	D	G	R	T	N	E	D	A	G	V	L	A	A	G	L	L	X	A	A	P	L	G	L	P	V	A	V	H	A	E	D	A	G	L	R	R	N	G	V	X	N	D	G	P	L	A	D	L	L	G	L	P
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	S																G	G	G	T														T	T		S				S							T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	131	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

																																			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	D	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	F	T	G	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	G	N	P	P	E	A	E	A	A	R	I	A	R	D	L	E	V	L	R	Y	A	L	R	R	S	P	A	T	P	R	L	H	V	Q	H	L	S	T	K	R	G	L	E	L	V	R	E	A	K	R	A	G	L	P	V	T	A	E	A	T	P	H	H	L	T	L	T	E	E	A	L	R	T	F	D	P	L	F	K	V
Template Known Secondary structure																										S	S							T	T																T	T																G	G	G	G	G	G			G	G	G
Template Predicted Secondary structure
Template SS confidence
	199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

	174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence	T	G	W	V	C	D	E	R	R	G	L	E	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	L	T	P	K	P	S	S	R	.	.	.	.	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D
Query Conservation																																															.	.	.	.
Alig confidence																						.	.																								.	.	.	.
Template Conservation																						.	.
Template Sequence	A	P	P	L	R	G	E	E	D	R	E	A	L	L	E	G	L	L	D	G	T	.	.	L	D	A	I	A	T	D	H	A	P	H	T	L	A	E	K	E	K	D	L	L	R	A	P	F	G	I	P	S	L	E	V	A	F	P	L	L	Y	T	E	L	H	L	K	R	G	F	P	L	Q	R	L	V	E	L	F	T
Template Known Secondary structure	S	S																		T	S	.	.	S							B					T	T	G	G	G	S		T	T	T	S				B			T	T	T									T																T
Template Predicted Secondary structure																						.	.
Template SS confidence
	279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	N	V	K	T	L	F	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence	D	G	P	R	R	V	L	G	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
	357	.	.	360	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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