Job Description P27859 Confidence 98.82% Date Thu Jan 5 11:44:22 GMT 2012 Rank 71 Aligned Residues 237 % Identity 14% Template c2ragB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20														.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																		40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	A	K	D	R	D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	S	Q	Q	A	Q	K	L	A	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	D	T	H	L	D	T	P	A	H	F	G	R	P	G	W	D	I	A	D	H	H	E	V	E	H	D	F	S	Q	V	D	L	P	R	M	N	Q	G	G	L	D	G	G	F	F	V	V	Y	I	G	Q	G	E	L	T	E	K	G	Y	T	Y	A	R	D	Y	A	L	H	R	T	I	E	I	R	E	M	L	A
Template Known Secondary structure									T					T	S	T	T			T	T	S																				T															S	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		51	.	.	.	.	.																				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Query Sequence		Q	Y	S	S	C	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		A	N	P	D	T	F	E	M	A	L	T	S	D	D	A	R	R	I	A	K	A	G	K	K	F	A	F	V	S	M	E	N	S	W	P	V	G	E	D	L	S	L	V	E	T	F	Y	K	E	.	.	.	.	.	.	.	.	.	G	L	R	M	A	G	P	V	H	F	R	N	N	Q	L	A	D	S	S	T	D	P
Template Known Secondary structure				T	T	T					S	S										T	T												G	G	G	T	T		T									T	.	.	.	.	.	.	.	.	.	T						S			S	S			S	S	B		B	S	S		T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
											108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	E	R	F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	.	.	.	.	.	.	C	F	T	G	.	.	.	T	R	E	E	M	Q	A	C	V	A	H	G	I
Query Conservation		.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.																.	.									.	.	.	.	.	.					.	.	.
Template Conservation																														.																.	.
Template Sequence		K	G	K	I	W	N	G	Y	S	P	L	G	L	R	W	L	A	E	A	N	R	L	G	I	V	I	D	V	.	S	H	A	S	D	D	V	V	D	Q	S	V	A	L	S	.	.	K	A	P	I	I	A	S	H	S	G	P	K	A	V	Y	D	H	P	R	N	L	D	D	A	R	L	K	K	I	A	D	A	G	G
Template Known Secondary structure		T			S	S	S	S	B															T				B		.	T	T	B													.	.	S	S										T	T	T	S			T	T													T	T
Template Predicted Secondary structure																														.																.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																																									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	L	L	P	L	I	P	A	E	K	L	L	I	E	T	D	A	P	Y	L	L	P
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		A	I	C	I	N	S	I	Y	L	T	D	T	T	P	S	P	E	A	P	D	M	K	T	A	T	P	E	A	V	K	A	Y	A	D	K	R	A	A	I	D	K	A	H	P	A	A	R	G	D	F	D	L	Y	M	K	S	M	L	H	V	L	K	V	A	G	P	K	G	V	C	V	G	A	D	W	.	.	.	.	.
Template Known Secondary structure							S	S	S	S	S											T	T	T	S																			S						B																	T	T	S							T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	T	P	K	P	S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G
Query Conservation
Alig confidence		.	.																									.
Template Conservation		.	.																									.
Template Sequence		.	.	D	G	G	G	G	M	D	G	F	E	D	I	T	D	L	P	K	I	T	A	R	L	K	A	.	E	G	Y	S	D	A	D	I	E	A	I	W	S	G	N	V	L	R	I	V	D
Template Known Secondary structure		.	.	T	T	T			B	B	T	B	S	S	G	G	G	T										.	T	T											T
Template Predicted Secondary structure		.	.																									.
Template SS confidence
				362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions