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Job DescriptionP27859
Confidence98.06%DateThu Jan 5 11:44:22 GMT 2012
Rank118Aligned Residues242
% Identity13%Templatec2icsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:adenine deaminase; PDBTitle: crystal structure of an adenine deaminase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30........ .40.........50.........60 .........70
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Query Sequence  MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN. LRESQQAQKLARQYSSCWSTAG. . . . . . . . . VHPHDSSQWQ
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Template Sequence  WIDDHVHCFEKX. ALYYDYPDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKV
Template Known Secondary structure 


TTS.SSS


TGGGTSSS
TTTTSSS

SSTTTTSSS
TTSSGGG
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   56...60....... ..70.........80.........90.........100.........110.........120.........130....
 
   71........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  AATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGA.
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Template Sequence  QASLVKKAIQELPDFVVGIARXSRTVIGDNGI. . . . TPLELAKQIQQENQEIPLXVHIGSAPPHLDEILALXEKGDVLTH
Template Known Secondary structure 

TTT

STT
TT....TTTT



SSSS


TT
S
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   135....140.........150.........160...... ...170.........180.........190.........200.........210
 
   150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  . . . . . . . . . VLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRR
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Template Sequence  CFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHG. TDSFNFHVAETALREGXK. AASISTDIY. . . . . IRNRENGPVY
Template Known Secondary structure  TT

STTSSTTTT
TT



T.TTS

TT

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SB



B
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   212.......220.........230.........240....... ..250.........260..... ....270.... .....280....
 
   221........230.........240.........250.........
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Query Sequence  NEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIA
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Template Sequence  DLATTXEKLRVV. . . . . GYDWPEIIEKVTKAPAENFHLT
Template Known Secondary structure 
.....T

TTTTT
T
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   285....290...... ...300.........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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