Job Description P27859 Confidence 98.84% Date Thu Jan 5 11:44:22 GMT 2012 Rank 68 Aligned Residues 247 % Identity 13% Template c2i5gB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																											.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	I	G	V	N	L	T	S	S	Q	F	A	K	D	R	D	D	V	V	A	C	A	F	D	A	G	V	N	G	L	L	I	T	G	T	N	L	R	E	S	Q	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	L	A	R	Q	Y	S	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		V	I	D	G	L	I	I	A	K	W	N	.	.	.	.	.	.	R	E	L	F	E	D	X	R	K	G	G	L	T	A	A	N	C	T	V	S	V	W	E	G	F	Q	A	T	V	N	N	I	T	A	S	N	K	L	I	R	D	N	S	D	L	V	I	P	V	R	S	T	A	D	I	R	K	A	K	E	Q	G	K
Template Known Secondary structure												S	.	.	.	.	.	.	T	T	T	T	T					T	T										S	S																				T	T	T	T					S	S											T
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	S	T	A	G	V	H	P	H	D	S	S	Q	W	Q	A	A	T	E	E	A	I	I	E	L	A	A	Q	P	E	V	V	A	I	G	E	C	G	L	D	F	N	R	N	F	S	T	P	E	E	Q	E	R	A	F	V	A	Q	L	R	I	A	A	D	L	N	M	P	V	F	M	H	C	R	D	A	H	E	R
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		T	G	I	L	Y	G	F	Q	N	A	H	A	F	E	D	Q	I	G	Y	V	E	V	F	K	Q	L	G	V	G	I	V	Q	X	C	Y	N	T	Q	N	L	V	G	T	G	C	Y	E	R	D	G	G	L	S	G	F	G	R	E	I	V	A	E	X	N	R	V	G	I	X	C	D	L	.	S	H	V	G	S	K	T
Template Known Secondary structure									S		G	G	G	G	T	T		T									T	T						S			S	S			S	S				T	T	S																				T						.	T	T	T		T	T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		F	M	T	L	L	E	P	W	L	D	K	L	P	G	A	V	L	H	C	.	.	.	.	.	.	.	.	.	F	T	G	T	R	E	E	M	Q	A	C	V	A	H	G	I	Y	I	G	I	T	G	W	V	C	D	E	R	R	G	L	.	.	.	.	.	.	.	.	.	E	L	R	E	L	L	P	L	I	P	A	E
Query Conservation																					.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence										.	.										.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation										.	.
Template Sequence		S	E	E	V	I	L	E	S	.	.	K	K	P	V	C	Y	S	H	C	L	P	S	G	L	K	E	H	P	R	N	K	S	D	E	E	L	K	F	I	A	D	H	G	G	F	V	G	V	T	X	F	A	P	F	L	K	K	G	I	D	S	T	I	D	D	Y	A	E	A	I	E	Y	V	X	N	I	V	G	E	D
Template Known Secondary structure										.	.	S	S									B	T	T	T	S			T	T	S	B											T	T									G	G	G	S	T	T	G	G	G		B																	T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		166	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.																			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	L	I	E	T	D	A	P	Y	L	L	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	P	K	P	S	S	R	R	N	E	P	A	H	L	P	H	I	L	Q	R	I	A	H	W	R	G	E	D	A	A	W	L	A	A	T	T	D	A	N	V	K	T	L	F	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																											.
Template Sequence		A	I	G	I	G	T	D	F	T	Q	G	H	G	H	D	F	F	E	W	L	T	H	D	K	G	Y	A	R	R	L	T	N	F	G	K	I	V	N	P	L	G	I	R	T	V	G	E	F	P	N	L	T	E	T	L	L	K	.	R	G	X	P	E	R	V	V	R	K	V	X	G	E	N	W	V	R	V	L	R
Template Known Secondary structure		S							B		T	T											B	G	G	G	T	S	S	B						S					B	T		S	S	G	G	G	T										.	T	T											T
Template Predicted Secondary structure																																																											.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions