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Job DescriptionP27859
Confidence99.17%DateThu Jan 5 11:44:22 GMT 2012
Rank54Aligned Residues238
% Identity14%Templatec1xrfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dihydroorotase; PDBTitle: the crystal structure of a novel, latent dihydroorotase from aquifex2 aeolicus at 1.7 a resolution
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30....... ..40.........50.........60.........70..
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Query Sequence  MFDIGVNLTSS. . QFAKDRDDVVACAFDAGVNGLLITGT. . . . . . NLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAA
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Template Sequence  FIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGK. .
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   57..60.........70.........80.........90.........100.........110.........120.........130....
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  TEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLH
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Template Sequence  . . . . . . . . . EIADFYSLKEAGCVAFTDDGSPVMDSSVMRKALELASQLGVPIMDHAEEIQIARDGILAQRTGGHVHIQHV
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   135....140.........150.........160.........170.........180.........190.........200.....
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  CFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQR
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Template Sequence  STKLSLEIIEFFKEKGVKITCEVNPNHLLDRLALIEGVKRGI. . IDCFATDHAPHQTMP. . . . . . . GIIGLQTALPSALE
Template Known Secondary structure 
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   234.....240.........250.........260.........270..... ....280.........290 .........300....
 
   233......240.........250........
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Query Sequence  IAHWRGEDAAWLAATTDANVKTLFGI
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Template Sequence  LYRKGIISLKKLIEMFTINPARIIGV
Template Known Secondary structure  TTSS
TTT
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   337..340.........350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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