 |
Job Description | P45757 | Confidence | 90.57% | Date | Wed Jan 25 15:20:55 GMT 2012 |
Rank | 232 | Aligned Residues | 116 |
% Identity | 9% | Template | d2qaaa1 |
SCOP info | Trypsin-like serine proteases
| Trypsin-like serine proteases
| Prokaryotic proteases
|
Resolution | 1.23 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | P | F | H | L | A | N | H | N | K | D | A | A | I | N | I | L | I | I | F | I | S | I | G | S | I | I | F | N | . |
. |
. |
. |
. |
V | N | Y | F | H | T | T | I | V | K | N | G | Q | I | I | N | Q | P | T | N | A | F | Q | . |
. |
S | D | F | S | L | A | A | L | W | R | N | E | N | H | A | G | V | K | D | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   | . | . | . | . | . |
|   |
|
|   |
|   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|   |
| . | . |   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | G | T | T | S | G | . |
. |
S | S | F | P | N | N | D | Y | G | I | V | R | Y | T | N | T | T | I | P | K | D | G | T | V | G | G | Q | D | I | T | S | A | A | N | A | T | V | G | M | A | V | T | R | R | G | S | T | T | G | T | H | S | G | S | V | T | A | L | N | A | T | V | N | Y | G | G | G | D | V | V | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . |  |  |
| S | B | S |
|  |  |  |  |  |  |
|
| S | S | S |
|
|
| S |  |  | T | T |  |  |
|
|  |  |
|
|
|
| T | T |
|  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | |
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | V | A | V | N | Q | E | T | P | K | L | S | . |
. |
. |
. |
I | A | L | N | G | I | V | L | T | S | N | D | E | T | S | F | V | L | I | N | E | G | S | E | Q | K | R | Y | S | L | N | E | A | L | E | S | A | P | G |
Query Conservation |   |
  |   |
|
|
|
|
|   |
|
|   |
|
| . | . | . | . |
|   |
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|   |
| . | . | . | . |
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
G | M | I | R | T | N | V | C | A | E | P | G | D | S | G | G | P | L | Y | S | G | T | R | A | I | G | L | T | S | . |
. |
. |
. |
G | G | S | G | N | C | S | S | G | . |
. |
. |
G | T | T | F | F | Q | P | V | T | E | A |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
|
|
| T | T |
| T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  | T | T | T |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
. | . | 210 | . | . | . | . | . | . | |
|
|
. | . | . | 220 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|