Return to main results Retrieve Phyre Job Id

Job DescriptionP45757
Confidence99.55%DateWed Jan 25 15:20:55 GMT 2012
Rank15Aligned Residues98
% Identity17%Templated1lcya1
SCOP infoPDZ domain-like PDZ domain-like HtrA-like serine proteases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQA
Query Conservation   
 

                 
 
     
        
  
  
   
 
  


  



  


  
     
   
Alig confidence 



















........



















































Template Conservation 
  


    
       
 ........           

 
  
   


  


  



  


  
     
   
Template Sequence  RRYIGVMMLTLSPSILAELQ. . . . . . . . LREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEA
Template Known Secondary structure 




T........TS
TTS


SS

TTST

TT
TT

S
Template Predicted Secondary structure 





........



























Template SS confidence 















































































   226...230.........240..... ....250.........260.........270.........280.........290.......
 
   230.........240.........250........
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  LSLLLTQQSAQFTIRRNGVPRLINVSVGE
Query Conservation 
     
  
 
 
 
 
    
 
 


Alig confidence 
...
























Template Conservation 
...     
 
 
 
 
      
 
  
Template Sequence  V. . . RTQSQLAVQIRRGRETLTLYVTPEV
Template Known Secondary structure  ...TT
SSTT

Template Predicted Secondary structure  ...





Template SS confidence 




























   298 .300.........310.........320...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions