Job Description P45757 Confidence 99.97% Date Wed Jan 25 15:20:55 GMT 2012 Rank 2 Aligned Residues 235 % Identity 15% Template c4a8aI_ PDB info PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme Resolution 14.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80
Predicted Secondary structure																																																							.	.																		.	.
Query SS confidence																																																							.	.																		.	.
Query Sequence		R	F	P	F	H	L	A	N	H	N	K	D	A	A	I	N	I	L	I	I	F	I	S	I	G	S	I	I	F	N	V	N	Y	F	H	T	T	I	V	K	N	G	Q	I	I	N	Q	P	T	N	A	F	Q	.	.	S	D	F	S	L	A	A	L	W	R	N	E	N	H	A	G	V	.	.	K	D	A	N	P	V
Query Conservation																																																							.	.																		.	.
Alig confidence									.	.																																													.	.																		.	.
Template Conservation									.	.
Template Sequence		E	F	D	A	K	L	I	.	.	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I
Template Known Secondary structure									.	.				T	T	T	T							S	S			S									G	G	G			S										S	T	T		S	S															S		S	S	S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		99	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		A	V	N	Q	E	T	P	K	L	S	.	.	.	.	.	I	A	L	N	G	I	V	L	T	S	N	D	E	T	S	F	V	L	I	N	E	G	S	E	Q	K	R	Y	S	L	N	E	A	L	E	S	A	P	G	T	F	I	R	K	I	N	K	T	S	V	V	F	E	T	H	G	H	Y	E	K	V	T	L	H	P
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.	.	.											.	.																		.	.	.	.	.	.
Template Conservation																													.	.	.	.											.	.																		.	.	.	.	.	.
Template Sequence		Q	T	D	A	S	I	N	R	G	N	A	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	.	.	.	.	A	I	L	A	P	G	G	G	S	V	.	.	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	.	.	.	.	.	.	L	I	D	F	G	E	I	K	R	G	L	L	G	I
Template Known Secondary structure					S				T	T		T	T						T	T	S								.	.	.	.					T	T	S	S			.	.	S							T	T									.	.	.	.	.	.			S	S				T	T	S	S
Template Predicted Secondary structure																													.	.	.	.											.	.																		.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	D	I	I	K	Q	P	D	S	E	S	Q	N	V	L	A	D	Y	I	I	A	T	P	I	R	D	G	E	Q	I	Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	H	P	D	E	V	S	Q	A	L	S	L	L	L	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	T	E	M	S	A	D	I	A	K	A	F	N	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P
Template Known Secondary structure				B										S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S		B	B						T	T	S	G	G	G	S	S				T	T						S	S	S	S	B			T									T	T	S		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260															.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	S	A	Q	F	T	I	R	R	N	G	V	P	R	L	I	N	V	S	V	G	E	L	T	G	M	N	G	L	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	S	A	E	M	I	T	P	A	L	E	G	A	T
Template Known Secondary structure		S									T	T	S	S											S	S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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