Job Description P45757 Confidence 99.19% Date Wed Jan 25 15:20:55 GMT 2012 Rank 27 Aligned Residues 117 % Identity 9% Template c3mmgB_ PDB info PDB header:viral protein, hydrolase Chain: B: PDB Molecule:nuclear inclusion protein a; PDBTitle: crystal structure of tobacco vein mottling virus protease Resolution 1.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		H	N	K	D	A	A	I	N	I	L	I	I	F	I	S	I	G	S	I	I	F	N	V	N	Y	F	H	T	T	I	V	K	N	G	Q	I	I	N	Q	P	T	N	A	F	Q	S	D	F	S	L	A	A	L	W	R	N	E	N	H	A	G	V	K	D	A	N	P	V	A	V	N	Q	E	T	P	K	L	S	.	.
Query Conservation																																																																																.	.
Alig confidence																	.																																																															.	.
Template Conservation																	.
Template Sequence		M	K	P	V	E	G	R	D	I	I	V	I	K	M	A	.	K	D	F	P	P	F	P	Q	K	L	K	F	R	Q	P	T	I	K	D	R	V	C	M	V	S	T	N	F	Q	Q	K	S	V	S	S	L	V	S	E	S	S	H	I	V	H	K	E	D	T	S	F	W	Q	H	W	I	T	T	K	D	G	Q	A	G
Template Known Secondary structure						T	B	S	S								.	T	T	S					S				B					T	T										S	S		G	G	G								B						T	T	S	S										T	T		T	T
Template Predicted Secondary structure																	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
					91	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.					.
Query SS confidence		.	.	.					.
Query Sequence		.	.	.	I	A	L	N	.	G	I	V	L	T	S	N	D	E	T	S	F	V	L	I	N	E	G	S	E	Q	K	R	Y	S	L	N	E	A	L	E	S	A	P	G	T	F	I	R	K	I	N	K	T
Query Conservation		.	.	.					.
Alig confidence		.	.	.					.									.	.	.	.									.	.	.	.
Template Conservation																		.	.	.	.									.	.	.	.
Template Sequence		S	P	L	V	S	I	I	D	G	N	I	L	G	I	H	S	.	.	.	.	L	T	H	T	T	N	G	S	.	.	.	.	N	Y	F	V	E	F	P	E	K	F	V	A	T	Y	L	D	A	A	D	G
Template Known Secondary structure							T	T	T									.	.	.	.				T	T	T			.	.	.	.								T	T						T	S			S	S
Template Predicted Secondary structure																		.	.	.	.									.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions