Job Description P45757 Confidence 98.17% Date Wed Jan 25 15:20:55 GMT 2012 Rank 166 Aligned Residues 61 % Identity 8% Template c2vspA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		I	R	D	G	E	Q	I	Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	.	.	H	P	D	E	V	S	Q	A	L	S	L	L	L	T	Q	Q	S	A	Q	F	T	I
Query Conservation																																											.	.
Alig confidence																																											.	.												.	.
Template Conservation																																																								.	.
Template Sequence		L	N	A	I	R	G	L	P	G	S	F	I	K	E	V	Q	K	G	G	P	A	D	L	A	G	L	E	D	E	D	V	I	I	E	V	N	G	V	N	V	L	D	E	P	Y	E	K	V	V	D	R	I	Q	S	.	.	S	G	K	N	V	T	L	L	V
Template Known Secondary structure			B			T	T		S			B		.				T	T	S					T	T			T	T							T	T				T	T	S										T	T	.	.	S		S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions