 |
Job Description | P45757 | Confidence | 98.51% | Date | Wed Jan 25 15:20:55 GMT 2012 |
Rank | 67 | Aligned Residues | 67 |
% Identity | 13% | Template | c2v90E_ |
PDB info |
PDB header:protein-binding | Chain: E: PDB Molecule:pdz domain-containing protein 3; |
PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3)
|
Resolution | 2.00 Å |
|
 |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | L | R | L | N | P | R | K | G | L | N | A | F | T | T | S | L | L | Q | P | G | D | I | A | L | R | I | N | N | L | S | L | T | H | P | D | E | V | S | Q | A | L | S | L | L | L | T | Q | Q | S | A | Q | F | T | I | R | R | N | G | V | P | R | L | I | N | V |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
P | G | Q | F | L | W | E | V | D | P | G | L | P | A | K | K | A | G | M | Q | A | G | D | R | L | V | A | V | A | G | E | S | V | E | G | L | G | H | E | E | T | V | S | R | I | Q | G | Q | G | S | C | V | S | L | T | V | V | D | P | E | A | D | R | E | T | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|