Job Description P45757 Confidence 99.95% Date Wed Jan 25 15:20:55 GMT 2012 Rank 10 Aligned Residues 199 % Identity 13% Template c2r3yC_ PDB info PDB header:hydrolase/hydrolase activator Chain: C: PDB Molecule:protease degs; PDBTitle: crystal structure of the degs protease in complex with the2 ywf activating peptide Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80
Predicted Secondary structure																																																							.	.																		.	.
Query SS confidence																																																							.	.																		.	.
Query Sequence		R	F	P	F	H	L	A	N	H	N	K	D	A	A	I	N	I	L	I	I	F	I	S	I	G	S	I	I	F	N	V	N	Y	F	H	T	T	I	V	K	N	G	Q	I	I	N	Q	P	T	N	A	F	Q	.	.	S	D	F	S	L	A	A	L	W	R	N	E	N	H	A	G	V	.	.	K	D	A	N	P	V
Query Conservation																																																							.	.																		.	.
Alig confidence									.	.																																													.	.																		.	.
Template Conservation									.	.
Template Sequence		V	F	E	A	L	L	V	.	.	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L
Template Known Secondary structure									.	.				T	T	T	T										S									T	T					T	T									G	G	G	S																	S	S	S	S		S
Template Predicted Secondary structure									.	.
Template SS confidence
		113	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		81	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																					.
Query SS confidence												.	.	.	.	.																					.
Query Sequence		A	V	N	Q	E	T	P	K	L	S	.	.	.	.	.	I	A	L	N	G	I	V	L	T	S	N	D	E	T	S	F	V	L	I	N	.	E	G	S	E	Q	K	R	Y	S	L	N	E	A	L	E	S	A	P	G	T	F	I	R	K	I	N	K	T	S	V	V	F	E	T	H	G	H	Y	E	K	V	T	L	H
Query Conservation												.	.	.	.	.																					.
Alig confidence												.	.	.	.	.													.	.	.	.					.																										.	.	.	.	.	.
Template Conservation																													.	.	.	.																															.	.	.	.	.	.
Template Sequence		Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	.	.	.	.	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	.	.	.	.	.	.	L	I	R	D	G	R	V	I	R	G	Y	I	G
Template Known Secondary structure					S				T	T		T	T						T	T									.	.	.	.							S	S	S					S																	.	.	.	.	.	.					S	S							S
Template Predicted Secondary structure																													.	.	.	.																															.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	P	D	I	I	K	Q	P	D	S	E	S	Q	N	V	L	A	D	Y	I	I	A	T	P	I	R	D	G	E	Q	I	Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	H	P	D	E	V	S	Q	A	L	S	L	L	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Sequence		I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	.	.	.	.	.	T	M	D	Q	V	A	E	I	R
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B			S	S				G	G	G	T	T	T			S	S	B					B	S	S				.	.	.	.	.							T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		261	.																																	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Q	S	A	Q	F	T	I	R	R	N	G	V	P	R	L	I	N	V	S	V	G	E	L	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		P	G	S	V	I	P	V	V	V	L	Q	.	.	.	.	.	.	.	.	V	T	I	Q	E	Y	P
Template Known Secondary structure		T	T					B					.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.									.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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