Job Description P45757 Confidence 98.49% Date Wed Jan 25 15:20:55 GMT 2012 Rank 69 Aligned Residues 57 % Identity 18% Template c2qt5A_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:glutamate receptor-interacting protein 1; PDBTitle: crystal structure of grip1 pdz12 in complex with the fras12 peptide Resolution 2.30 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																				.																			.	.
Query SS confidence																				.																			.	.
Query Sequence		Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	.	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	H	P	.	.	D	E	V	S	Q	A	L	S	L	L	L	T	Q	Q	S	A	Q	F	T	I	R	R	N
Query Conservation																				.																			.	.
Alig confidence																				.																			.	.											.	.
Template Conservation																																																			.	.
Template Sequence		R	P	V	V	I	T	C	V	R	P	G	G	P	A	D	R	E	G	T	I	K	P	G	D	R	L	L	S	V	D	G	I	R	L	L	G	T	T	H	A	E	A	M	S	I	L	K	Q	C	.	.	G	Q	E	A	T	L	L	I	E	Y	D
Template Known Secondary structure											T	T	S										T	T							T	T				T	T												T	T	.	.		S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions