Job Description P45757 Confidence 99.57% Date Wed Jan 25 15:20:55 GMT 2012 Rank 14 Aligned Residues 104 % Identity 18% Template c2joaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances Resolution UNK

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	Y	E	K	V	T	L	H	P	G	L	P	D	I	I	K	Q	P	D	S	E	S	Q	N	V	L	A	D	Y	I	I	A	T	P	I	R	D	G	E	Q	I	Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	H	P	D	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		G	S	H	M	K	K	Y	I	G	I	R	M	M	S	L	T	S	S	K	A	K	E	L	K	D	R	H	R	D	F	P	D	.	.	.	.	.	.	.	.	V	I	S	G	A	Y	I	I	E	V	I	P	D	T	P	A	E	A	G	G	L	K	E	N	D	V	I	I	S	I	N	G	Q	S	V	V	S	A	N	D
Template Known Secondary structure				S				B		S																			T	T	S		S	.	.	.	.	.	.	.	.				S								S	S	S						T			T	T					B		S	S		B			S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	A	L	S	L	L	L	T	Q	Q	S	A	Q	F	T	I	R	R	N	G	V	P	R	L	I	N	V	S	V	G	E	L	T
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		V	S	D	V	I	K	R	.	.	.	E	S	T	L	N	M	V	V	R	R	G	N	E	D	I	M	I	T	V	I	P	E	E	I	D
Template Known Secondary structure									.	.	.		S	S								T	T										B
Template Predicted Secondary structure									.	.	.
Template SS confidence
		448	.	450	.	.	.	.				.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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