Job Description P45757 Confidence 64.79% Date Wed Jan 25 15:20:55 GMT 2012 Rank 239 Aligned Residues 99 % Identity 8% Template c1qy6A_ PDB info PDB header:protease Chain: A: PDB Molecule:serine protease; PDBTitle: structue of v8 protease from staphylococcus aureus Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		P	T	L	R	F	P	F	H	L	A	N	H	N	K	D	A	A	I	N	I	L	I	I	F	I	S	I	G	S	I	I	.	.	.	.	F	N	V	N	Y	F	H	T	T	I	V	K	N	G	Q	I	I	N	Q	P	T	N	A	F	Q	S	D	F	S	L	A	A	L	W	R	N	E	N	H	A	G	V	K	D	A
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.																																.	.
Template Conservation																																																																				.	.
Template Sequence		G	G	F	T	A	E	Q	I	T	K	Y	S	G	E	G	D	L	A	I	V	K	F	S	P	N	E	Q	N	K	H	I	G	E	V	V	K	P	A	T	M	S	N	N	A	E	T	Q	T	N	Q	N	I	T	V	T	G	Y	P	G	D	K	P	V	A	T	M	.	.	W	E	S	K	G	K	I	T	Y	L	K	G
Template Known Secondary structure													S	S	S	S											T	T	S							S					B				S	S			T	T										T	T	S	S	T	T			.	.												T
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		N	P	V	A	V	N	Q	E	T	P	K	L	S	.	.	.	.	.	I	A	L	N	G	I	V	L	T	S	N	D
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		E	A	M	Q	Y	D	L	S	T	T	G	G	N	S	G	S	P	V	F	N	E	K	N	E	V	I	G	I	H	W
Template Known Secondary structure		T										T	T		T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions