Job Description P45757 Confidence 98.10% Date Wed Jan 25 15:20:55 GMT 2012 Rank 187 Aligned Residues 56 % Identity 13% Template c1obyA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		I	Y	G	L	R	L	N	P	R	K	G	L	N	A	F	T	T	S	L	L	Q	P	G	D	I	A	L	R	I	N	N	L	S	L	T	.	.	H	P	D	E	V	S	Q	A	L	S	L	L	L	T	Q	Q	S	A	Q	F	T	I	R
Query Conservation																																					.	.
Alig confidence																																					.	.												.	.
Template Conservation																																																		.	.
Template Sequence		F	K	N	G	K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	N	G	Q	N	V	I	G	L	K	D	S	Q	I	A	D	I	L	S	T	.	.	S	G	T	V	V	T	I	T	I	M
Template Known Secondary structure				T	T							T	T	S						T			T	T		B					T	T				T	T													.	.	S		S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions