Job Description P75883 Confidence 99.78% Date Thu Jan 5 12:15:35 GMT 2012 Rank 3 Aligned Residues 151 % Identity 19% Template c2w8iG_ PDB info PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. Resolution 2.99 Å

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		27	.	.	30	.	.	.				.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure									.	.	.							.																.
Query SS confidence									.	.	.							.																.
Query Sequence		T	I	Y	L	P	G	E	.	.	.	Q	Q	T	L	S	V	.	G	P	V	E	N	V	V	Q	L	V	T	Q	P	Q	L	.	R	D	R	L	W	W	P	G	A	L	L	T	D	S	A	A	K	A	K	A	L	K	D	Y	Q	H	V	M	A	Q	L	A	S	W	E	A	E	A	D	D	D	V	A	A	T	I	K
Query Conservation									.	.	.							.																.
Alig confidence									.	.	.							.																.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	Y	V	T	G	E	V	A	N	S	G	K	Q	A	I	T	N	I	P	L	T	V	M	D	A	I	N	A	A	G	G	L	A	A	D	A	D	W	R	N	V	V	L	T	H	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	B	S	S								S	S			B								T	T	S	B		T	T	B		G	G	G						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.																	.
Query SS confidence																																																	.																	.
Query Sequence		S	V	R	Q	Q	L	L	N	L	N	I	T	G	R	L	P	V	K	L	D	P	D	F	V	R	V	D	E	N	S	N	P	P	L	V	G	D	Y	T	L	Y	T	V	Q	R	P	V	.	T	I	T	L	L	G	A	V	S	G	A	G	Q	L	P	W	.	Q	A	G	R	S	V	T	D	Y	L	Q	D	H	P	R
Query Conservation																																																	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																			.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	K	I	S	L	Y	A	L	M	Q	K	G	D	L	T	Q	N	H	L	L	Y	H	G	D	I	L	F	I	P	S	N	D	D	L	K	V	F	V	M	G	E	V	G	K	Q	S	T	L	K	M	D	R	S	G	M	T	L	A	E	A	L	G	N	A	E	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		B	G	G	G			B			T	T							B	G	G	G								S	B	S	S							B	T	T	B		B								T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure				.	.															.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence				.	.															.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		L	A	.	.	G	A	D	K	N	N	V	M	V	I	T	P	E	G	.	.	.	.	.	.	.	.	E	T	V	V	A	.	.	.	.	P	V	A	L	W	N	K	R	H	V	E	P	P	P	G	S	Q	L	W	L	G
Query Conservation				.	.															.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence				.	.															.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		I	S	Q	E	M	S	D	A	T	G	I	F	V	V	R	Q	L	K	G	D	R	T	G	K	I	A	D	I	Y	Q	L	N	A	Q	D	A	S	A	M	V	L	G	T	E	F	Q	L	Q	P	Y	D	I	V	Y	V	T
Template Known Secondary structure		B		T	T	T														S		S	S	S										T	T	S	T	T	G	G	G	G	G	G	S		B			T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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