Job Description P75883 Confidence 99.79% Date Thu Jan 5 12:15:35 GMT 2012 Rank 2 Aligned Residues 171 % Identity 18% Template c2j58G_ PDB info PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza Resolution 2.26 Å

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		22	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure														.	.	.									.														.
Query SS confidence														.	.	.									.														.
Query Sequence		A	Q	G	T	V	T	I	Y	L	P	G	E	.	.	.	Q	Q	T	L	S	V	G	P	.	V	E	N	V	V	Q	L	V	T	Q	P	Q	L	.	R	D	R	L	W	W	P	G	A	L	L	T	D	S	A	A	K	A	K	A	L	K	D	Y	Q	H	V	M	A	Q	L	A	S	W	E	A	E	A	D	D	D	V
Query Conservation														.	.	.									.														.
Alig confidence														.	.	.									.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	R	S	Q	K	V	Y	V	T	G	E	V	A	N	S	G	K	Q	A	I	T	N	I	P	L	T	V	X	D	A	I	N	A	A	G	G	L	A	A	D	A	D	W	R	N	V	V	L	T	H	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S								S	B	S	S								S	S			B								T	T	S	B		T	T	B		T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																						.																.
Query SS confidence																																																						.																.
Query Sequence		A	A	T	I	K	S	V	R	Q	Q	L	L	N	L	N	I	T	G	R	L	P	V	K	L	D	P	D	F	V	R	V	D	E	N	S	N	P	P	L	V	G	D	Y	T	L	Y	T	V	Q	R	P	V	.	T	I	T	L	L	G	A	V	S	G	A	G	Q	L	P	.	W	Q	A	G	R	S	V	T	D	Y	L
Query Conservation																																																						.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	K	I	S	L	Y	A	L	X	Q	K	G	D	L	T	Q	N	H	L	L	Y	H	G	D	I	L	F	I	P	S	N	D	D	L	K	V	F	V	X	G	E	V	G	K	Q	S	T	L	K	X	D	R	S	G	X	T	L	A	E	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		B	G	G	G			B			T	T							B	G	G	G								S	B	S	S							B	T	T	B		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		175	.	.	.	.	180		.	.		.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure								.			.											.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence								.			.											.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	H	P	R	L	.	A	G	.	A	D	K	N	N	V	M	V	I	T	.	.	P	E	G	E	T	V	V	A	P	V	A	L	W	N	K	.	.	.	.	.	.	.	.	.	.	R	H	V	E	P	P	P	G	S	Q	L	W	L	G	F	S	A	H	V	L	P	E	K	Y	A	D	L	N	D	Q	I	V	S
Query Conservation								.			.											.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence								.			.											.	.																.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		G	N	A	E	G	I	S	Q	E	X	S	D	A	T	G	I	F	V	V	R	Q	L	K	G	D	R	T	G	K	I	A	D	I	Y	Q	L	N	A	Q	D	A	S	A	X	V	L	G	T	E	F	Q	L	Q	P	Y	D	I	V	Y	V	T	T	A	P	.	.	.	.	.	.	L	V	R	W	N	R	V	I	S	Q
Template Known Secondary structure				T	T		B		T	T	T														S		T	T	S											S	S	G	G	G					T	T		B			T	T										.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.							.	.	.	350	.	.	.	.	.	.
		241	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		357	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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