Job Description P76205 Confidence 99.88% Date Thu Jan 5 12:20:31 GMT 2012 Rank 34 Aligned Residues 175 % Identity 15% Template c3jueA_ PDB info PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1 Resolution 2.30 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.															.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	V	G	T	P	A	L	F	L	A	M	M	N	G	H	T	D	N	V	K	I	F	M	Q	E	I	Q	S	L	V	D	N	H	I	I	H	E	D	N	L	V	K	L	L	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	A	N	E	T	P	G	L	Y	I	S	M	L	Y	G	F	D	E
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	W	E	P	E	L	V	K	L	M	C	E	L	G	N	V	I	I	N	Q	I	Y	E	A	R	V	E	A	M	A	V	K	K	P	G	P	S	C	S	R	Q	E	K	E	A	W	I	H	A	K	Y	V	E	K	K	F	L	T	K	L	P	L	H	P	G	A	L	L	F	R	A	S	G	H	P	P	S	L	P
Template Known Secondary structure		S													S										T	T	T	T	T	T	T	T						T	T	S														T	S		T	T			S													T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	I	F	L	N	A	L	T	T	P	I	A	Q	E	L	L	N	K	K	L	V	M	S	I	L	A	M	K	I	H	D	G	E	P	G	L	Y	A	A	M	E	N	N	H	P	L	C	V	T	R	F	L	S	K	I	N	G	I	A	F	K	Y	K	L	S	K	A	N	I	M	D	L	L	K	G	A	T	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	A	D	A	L	A	H	G	A	D	V	N	W	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	D	N	A	T	P	L	I	Q	A	T	A	A	N	S	L	L	A	C	E	F	L	L	Q	N	G	A	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	A	D	S
Template Known Secondary structure									T	T			T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T											T	T											T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.														.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.																.	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	T	P	A	L	Y	I	A	M	S	K	G	N	E	D	V	V	L	S	Y	I	S	T	L	G	A	F	A	K	K	H	S	F	S	Q	H	Q	L	F	T	L	L	A	A	K	N	H	D	N	M	S	A	V	H	I	A	I	H	H	K	H	Y	K	T	V	E	T	Y	Y	A	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	G	P	L	H	H	A	T	I	L	G	H	T	G	L	A	C	L	F	L	K	R	G	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	D	S	E	G	R	D	P	L	T	I	A	M	E	T	A	N	A	D	I	V	T	L	L	R	L	A
Template Known Secondary structure		T	S											T											T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S										T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.																.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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