Job Description P76205 Confidence 99.89% Date Thu Jan 5 12:20:31 GMT 2012 Rank 29 Aligned Residues 154 % Identity 22% Template c3ehrB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor Resolution 1.95 Å

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		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.																										.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	T	D	N	V	K	I	F	M	Q	E	I	Q	S	L	V	D	N	H	I	I	H	E	D	N	L	V	K	L	L	Q	T	K	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	T	P	G	L	Y	I	S	M	L	Y	G	F	D	E	I	I	D
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		G	Q	V	K	V	F	R	A	L	Y	T	F	E	P	R	T	.	P	D	E	L	Y	I	E	E	G	D	I	I	Y	I	T	D	X	S	D	T	N	W	W	K	G	T	S	K	G	R	T	G	L	I	P	S	N	Y	V	A	E	Q	A	E	S	I	D	N	P	L	H	E	A	A	K	R	G	N	L	S	W	L	R
Template Known Secondary structure										S	S		B			S	S	.	T	T	B			B		T	T										S	S	S							T	T																		S										T
Template Predicted Secondary structure																		.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	L	N	A	L	T	T	P	I	A	Q	E	L	L	N	K	K	L	V	M	S	I	L	A	M	K	I	H	D	G	E	P	G	L	Y	A	A	M	E	N	N	H	P	L	C	V	T	R	F	L	S	K	I	N	G	I	A	F	K	Y	K	L	S	K	A	N	I	M	D	L	L	K	G	A	T	A	Q	G	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	C	L	D	N	R	V	G	V	N	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	A	G	S	T	A	L	Y	W	A	C	H	G	G	H	K	D	I	V	E	X	L	F	T	Q	P	N	I	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	Q	N	K	L	G	D
Template Known Secondary structure						T	T			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										T	T									T	T	S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.																.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.															.	.	.	.	.	.	140	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	Y	I	A	M	S	K	G	N	E	D	V	V	L	S	Y	I	S	T	L	G	A	F	A	K	K	H	S	F	S	Q	H	Q	L	F	T	L	L	A	A	K	N	H	D	N	M	S	A	V	H	I	A	I	H	H	K	H	Y	K	T	V	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	H	A	A	A	W	K	G	Y	A	D	I	V	Q	L	L	L	A	K	G	A	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	R	N	I	E	K	K	L	A	F	D	X	A	T	N	A	A	C	A	S	L	L	K
Template Known Secondary structure											T												T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S									S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions