Job Description P76205 Confidence 99.79% Date Thu Jan 5 12:20:31 GMT 2012 Rank 46 Aligned Residues 122 % Identity 20% Template c3c5rB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:brca1-associated ring domain protein 1; PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	A	N	E	T	P	G	L	Y	I	S	M	L	Y	G	F	D	E	I	I	D	I	F	L	N	A	L	T	T	P	I	A	Q	E	L	L	N	K	K	L	V	M	S	I	L	A	M	K	I	H	D	G	E	P	G	L	Y	A	A	M	E	N	N	H	P	L	C	V	T	R	F	L	S	K	I	N	G	I	A
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		T	N	H	R	G	E	T	L	L	H	I	A	S	I	K	G	D	I	P	S	V	E	Y	L	L	Q	N	G	S	D	P	N	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	A	G	W	T	P	L	H	E	A	C	N	H	G	H	L	K	V	V	E	L	L	L	Q	H	K	A	L	V	.
Template Known Secondary structure				T	T	S											T											T	T			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S											T											T	T			T	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	Y	K	L	S	K	A	N	I	M	D	L	L	K	G	A	T	A	Q	G	T	P	A	L	Y	I	A	M	S	K	G	N	E	D	V	V	L	S	Y	I	S	T	L	G	A	F	A	K	K	H	S	F	S	Q	H	Q	L	F	T	L	L	A	A	K	N	H	D	N	M	S	A	V	H	I	A	I	H	H	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	G	Y	Q	N	D	S	P	L	H	D	A	A	K	N	G	H	V	D	I	V	K	L	L	L	S	Y	G	A	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	V	N	I	F	G	L	R	P	V	D	Y	T	D	D	E	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				G	G	G										T	T											T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S			G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520																.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		603	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	K	T	V	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	S	L	L	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions