Job Description P76205 Confidence 99.94% Date Thu Jan 5 12:20:31 GMT 2012 Rank 16 Aligned Residues 174 % Identity 15% Template c2vgeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rela-associated inhibitor; PDBTitle: crystal structure of the c-terminal region of human iaspp Resolution 2.10 Å

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		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	N	S	V	G	T	P	A	L	F	L	A	M	M	N	G	H	T	D	N	V	K	I	F	M	Q	E	I	Q	S	L	V	D	N	H	I	I	H	E	D	N	L	V	K	L	L	Q	T	K	S	A	N	E	T	P	G	L	Y	I	S	M	L	Y	G	F	D	E	I	I	D	I	F	L	N	A	L	T	T	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	R	L	N	P	L	V	L	L	L	D	A	A	L	T	G	E	L	E	V	V	Q	Q	A	V	K	E	M	N	D	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	N	E	E	G	I	T	A	L	H	N	A	I	C	G	A	N	Y	S	I	V	D	F	L	I	T	A	G	A	N	V
Template Known Secondary structure			T	T	S													T												S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S										T	T											T	T			T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.																.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		I	A	Q	E	L	L	N	K	K	L	V	M	S	I	L	A	M	K	I	H	D	G	E	P	G	L	Y	A	A	M	E	N	N	H	P	L	C	V	T	R	F	L	S	K	I	N	G	I	A	F	K	Y	K	L	S	K	A	N	I	M	D	L	L	K	G	A	T	A	Q	G	T	P	A	L	Y	I	A	.	.	M
Query Conservation																																																																															.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	H	G	W	T	P	L	H	C	A	A	S	C	N	D	T	V	I	C	M	A	L	V	Q	H	G	A	A	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	T	L	S	D	G	A	T	A	F	E	K	C	D	P	Y
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T										T	T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	T	T			T	G	G	G			T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		687	.	.																690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720															.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.									.	.	.	.	.	580	.	.	.										.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.		.	.	610	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																									.
Query SS confidence																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																									.
Query Sequence		S	K	G	N	E	D	V	V	L	S	Y	I	S	T	L	G	A	F	A	K	K	H	S	.	.	.	.	.	.	.	.	F	S	Q	H	Q	L	F	T	L	.	.	.	.	.	.	.	.	.	L	A	A	K	N	H	D	N	M	S	A	V	H	I	A	I	H	H	K	H	Y	K	T	V	.	E	T	Y	Y
Query Conservation																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																									.
Alig confidence																									.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		R	E	G	Y	A	D	C	A	T	Y	L	A	D	V	E	Q	S	M	G	L	M	N	S	G	A	V	Y	A	L	W	D	Y	S	A	E	F	G	D	E	L	S	F	R	E	G	E	S	V	T	V	L	R	R	D	G	P	E	E	T	D	W	W	W	A	A	L	H	G	Q	E	G	Y	V	P	R	N	Y	F
Template Known Secondary structure		S	T	T															T	T	T	S	G	G	G					S	S		B			S	S	T	T	B			B		T	T								S	S		T	T		S	S							T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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