Job Description P76205 Confidence 99.77% Date Thu Jan 5 12:20:31 GMT 2012 Rank 51 Aligned Residues 123 % Identity 20% Template c2jabC_ PDB info PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	E	T	P	G	L	Y	I	S	M	L	Y	G	F	D	E	I	I	D	I	F	L	N	A	L	T	T	P	I	A	Q	E	L	L	N	K	K	L	V	M	S	I	L	A	M	K	I	H	D	G	E	P	G	L	Y	A	A	M	E	N	N	H	P	L	C	V	T	R	F	L	S	K	I	N	G	I	A	F	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		S	D	L	G	K	K	L	L	E	A	A	R	A	G	Q	D	D	E	V	R	I	L	M	A	N	G	A	D	V	N	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	Y	G	L	T	P	L	Y	L	A	T	A	H	G	H	L	E	I	V	E	V	L	L	K	N	G	A	D	V	.	.	.
Template Known Secondary structure															T											T	T			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S											T											T	T			T	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	S	K	A	N	I	M	D	L	L	K	G	A	T	A	Q	G	T	P	A	L	Y	I	A	M	S	K	G	N	E	D	V	V	L	S	Y	I	S	T	L	G	A	F	A	K	K	H	S	F	S	Q	H	Q	L	F	T	L	L	A	A	K	N	H	D	N	M	S	A	V	H	I	A	I	H	H	K	H	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	A	V	D	A	I	G	F	T	P	L	H	L	A	A	F	I	G	H	L	E	I	A	E	V	L	L	K	H	G	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	D	K	F	G	K	T	A	F	D	I	S	I	G	N	G	N	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T				T	T												T											T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		605	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	V	E	T	Y	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A	E	I	L	Q	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions