Job Description P45537 Confidence 4.10% Date Thu Jan 5 12:02:58 GMT 2012 Rank 71 Aligned Residues 104 % Identity 7% Template c2d57A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a2 resolution by electron crystallography Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		R	L	R	I	V	N	R	S	V	G	T	V	V	G	L	I	I	A	G	V	A	L	H	F	K	.	.	.	.	.	I	P	E	G	Y	T	L	T	L	M	L	I	T	T	L	A	S	Y	L	I	L	R	K	N	Y	G	W	A	T	V	G	F	T	I	T	A	V	Y	T	L	Q	L	L	W	L	N	G	E	Q	Y
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		W	K	A	V	T	A	E	F	L	A	M	L	I	F	V	L	L	S	V	G	S	T	I	N	W	G	G	S	E	N	P	L	P	V	D	M	V	L	I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	I	N	P	A	V	T	V	A	M	V	C	T	R	K	I	S	I	A	K
Template Known Secondary structure																											S	S	S	S				T																											S			S											S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	R	L	I	D	T	I	I	G	C	L	I	A	F	G	G	T	V	W	L	W	P	Q	W	Q	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	F	Y	I	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G
Template Known Secondary structure																									T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions