 |
Job Description | P45537 | Confidence | 5.99% | Date | Thu Jan 5 12:02:58 GMT 2012 |
Rank | 49 | Aligned Residues | 94 |
% Identity | 13% | Template | c2c9kA_ |
PDB info |
PDB header:toxin | Chain: A: PDB Molecule:pesticidal crystal protein cry4aa; |
PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution
|
Resolution | 2.8 Å |
|
 |
  |   |
496 | . | . | . | 500 | . | . | . | . | . | . | . | |
|
. | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | C | L | I | A | F | G | G | T | V | W | . |
. |
L | W | P | Q | W | Q | S | G | L | L | R | K | N | A | H | D | A | L | E | A | Y | Q | E | A | I | R | L | I | L | S | E | D | P | Q | P | T | P | L | A | W | Q | R | M | R | V | N | Q | A | H | N | T | L | Y | N | S | L | N | Q | A | M | Q | E | P | A | F | N |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   | . |
|   |   |
|
|   |   |
|   |   |
|
Template Sequence |   |
L | G | L | A | L | I | G | F | G | T | L | I | P | V | L | F | P | A | Q | D | Q | S | N | T | . |
. |
. |
. |
. |
. |
. |
W | S | D | F | I | T | Q | T | K | N | I | I | K | K | E | I | A | S | T | Y | I | S | N | A | N | K | I | L | N | R | S | F | N | V | I | S | T | . |
Y | H | N | H | L | K | T | W | E | N | N |
Template Known Secondary structure |   |
T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |
| T | T | G | G | G |
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | . |  |  |  |  |  |  | T | T | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
574 | . | . | . | . | . | |
|
|
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | H | Y | L | A | D | . |
. |
. |
M | K | L | W | V | T | H | S | Q | F | I | V | E | H | I | N | A | M |
Query Conservation |   |
  |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
P | N | P | Q | N | T | Q | D | V | R | T | Q | I | Q | L | V | H | Y | H | F | Q | N | V | I | P | E | L |
Template Known Secondary structure |   |
|
|
| S | S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|