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Job DescriptionP18956
Confidence100.00%DateThu Jan 5 11:37:12 GMT 2012
Rank1Aligned Residues521
% Identity31%Templated2nlza1
SCOP infoNtn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Gamma-glutamyltranspeptidase-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  PVSYGVEEDVFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTA
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Template Sequence  DPQSYPYPSRRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWT. KGKLHG
Template Known Secondary structure 

S


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SSSSTT


TTS

TB
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   6...10.........20.........30.........40.........50.........60.........70........ .80....
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  IDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADD
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Template Sequence  LNGSGRAPMSLTMEAVKAKGYE. . QELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKY
Template Known Secondary structure 




TT

TTT

..SS

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SS
T


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   85....90.........100...... ...110.........120.........130.........140.........150.........160..
 
   191........200. ........210.........220.........230.........240.........250.........260.....
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Query Sequence  LKTYGSEVLPN. . . . . HENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKE
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Template Sequence  WKAAYDRVKTEWTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKE
Template Known Secondary structure 

SSTT
TTSS


TT


TTTTSTT



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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  DLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPD
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Template Sequence  DLACYRPEWVEPISIDYRGYRVWEIPPNGQGLV. ALEALNIVKGFEFY. . HKDTVDTYHKQIEAMKLAFVDGMKYVTEPS
Template Known Secondary structure  T




TT

TTBTT.TTS

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   243......250.........260.........270..... ....280......... 290.........300.........310.........
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
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Query Sequence  FVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGI
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Template Sequence  DMSVSVEQLLSDEYATERRKEIGEQALTPEP. . . . . . . . . . . GTPTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGI
Template Known Secondary structure  G
SS
T
TT

SS





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TTS

SSTT
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   320.........330.........340.........350 .........360.........370.........380........
 
   426...430.........440.........450.........460.........470.........480.........490.........500.....
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Query Sequence  LLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNV
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Template Sequence  AMQNRGHNFSLDPNHD. . . . . . . . . . NALKPGKRTYHTIIPGFLTKNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNP
Template Known Secondary structure  B

GGGGSB

TTST..........TB

TT



B



SS

SGGGTT


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   393......400........ .410.........420.........430.........440.........450.........460..
 
   506...510.........520.........530.........540........ .550.........560 .........570.........580
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Query Sequence  AEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKE. . . AMGSTQSIMVGP. DGELYGASDPRSVDDLTAGY
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Template Sequence  QAALDAPRWQWT. NGKQVQVEPTFPVDIAQALVRRGHKIQVVLDEGAFGRGQIIWRDPTTGVLAGGTEPRT. DGQVAAW
Template Known Secondary structure  S


.SSS
TTS
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TTTT


TTT


TTS.S

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   463......470.... .....480.........490.........500.........510.........520.........530.. .......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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